YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39996819, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	122 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39996819, gi|....

Description	E-value	Query Range	Subject Range
gi\|115364038, gi... - gi\|115378962\|ref\|ZP_01466095.1\| 6-pyruvoyl tetrahydropterin synthase family [Stigmatella aurantiaca ...	157.0	[0..3]	[121..657]
gi\|77996320, gi\|... - gi\|78044205\|ref\|YP_359798.1\| putative 6-pyruvoyl tetrahydrobiopterin synthase [Carboxydothermus hydr...	155.0	[0..1]	[122..1]
gi\|85814033 - gi\|85814033\|emb\|CAF31449.1\| putative gentamicin production protein [Micromonospora echinospora]	154.0	[0..3]	[120..2]
gi\|9948737, gi\|1... - gi\|9948737\|gb\|AAG06054.1\|AE004695_7 probable 6-pyruvoyl tetrahydrobiopterin synthase [Pseudomonas ae... gi\|152989185, gi... - gi\|94412899\|ref\|ZP_01292797.1\| hypothetical protein PaerP_01005313 [Pseudomonas aeruginosa PA7], gi\|... gi\|107102187 - gi\|107102187\|ref\|ZP_01366105.1\| hypothetical protein PaerPA_01003238 [Pseudomonas aeruginosa PACS2] gi\|11350848 - pir\|\|H83311 probable 6-pyruvoyl tetrahydrobiopterin synthase PA2666 [imported] - Pseudomonas aerugin... gi\|116050653, gi... - gi\|32037704\|ref\|ZP_00135976.1\| COG0720: 6-pyruvoyl-tetrahydropterin synthase [Pseudomonas aeruginosa... gi\|194546633, gi... - gi\|84320636\|ref\|ZP_00969009.1\| COG0720: 6-pyruvoyl-tetrahydropterin synthase [Pseudomonas aeruginosa... gi\|218771397, gi... - gi\|218891172\|ref\|YP_002440038.1\| putative 6-pyruvoyl tetrahydrobiopterin synthase [Pseudomonas aerug... gi\|84326995, gi\|... - gi\|84326995\|ref\|ZP_00975019.1\| COG0720: 6-pyruvoyl-tetrahydropterin synthase [Pseudomonas aeruginosa...	153.0	[0..3]	[120..2]
gi\|85813928 - gi\|85813928\|emb\|CAF31557.1\| putative fortimicin production protein [Micromonospora olivasterospora]	152.0	[0..3]	[120..2]
gi\|94553718, gi\|... - gi\|94971668\|ref\|YP_593716.1\| putative 6-pyruvoyl tetrahydropterin synthase [Candidatus Koribacter ve...	152.0	[0..1]	[122..1]
gi\|86568927, gi\|... - gi\|86742065\|ref\|YP_482465.1\| putative 6-pyruvoyl tetrahydropterin synthase [Frankia sp. CcI3], gi\|86...	152.0	[0..3]	[120..2]
gi\|71557763, gi\|... - gi\|71737210\|ref\|YP_275300.1\| 6-pyruvoyl tetrahydrobiopterin synthase, putative [Pseudomonas syringae...	152.0	[0..3]	[120..2]
gi\|104781054, gi... - gi\|95110041\|emb\|CAK14746.1\| putative 6-pyruvoyl tetrahydrobiopterin synthase SscR [Pseudomonas entom... gi\|95110041 - gi\|95110041\|emb\|CAK14746.1\| putative 6-pyruvoyl tetrahydrobiopterin synthase SscR [Pseudomonas entom...	150.0	[0..3]	[120..2]
gi\|222055916, gi... - gi\|222055916\|ref\|YP_002538278.1\| queuosine biosynthesis protein QueD [Geobacter sp. FRC-32], gi\|2215...	150.0	[0..1]	[122..1]

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Predicted Domain #1

Region A:
Residues: [1-122]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRLTIHTSF AAAHCLINYQ GDCENLHGHN WRVEVSVTAR ELDKAGLGID FKVLKQETNG  60
   61 LLRTLDHKYL NELEPFKEIS PSSENISRYL YHELSRRLND GNVTVESITV WESDNAAATY 120
  121 YE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	38.522879
Match:	2obaA
Description:	No description for 2obaA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits