YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39996815, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	235 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39996815, gi|....

Description	E-value	Query Range	Subject Range
gi\|42557692 - gi\|42557692\|emb\|CAF28667.1\| putative PAPS reductase [uncultured crenarchaeote]	231.0	[0..2]	[233..15]
gi\|25288814 - pir\|\|D90470 hypothetical protein cysH [imported] - Sulfolobus solfataricus gi\|241217505, gi... - gi\|241770850\|ref\|ZP_04768249.1\| adenylylsulfate reductase, thioredoxin dependent [Sulfolobus solfata... gi\|13816282, gi\|... - gi\|15899624\|ref\|NP_344229.1\| phosphoadenosine phosphosulfate reductase [Sulfolobus solfataricus P2],...	225.0	[0..1]	[235..2]
gi\|15922900, gi\|... - gi\|15922900\|ref\|NP_378569.1\| phosphoadenosine phosphosulfate reductase [Sulfolobus tokodaii str. 7],...	224.0	[0..2]	[235..3]
gi\|115363950, gi... - gi\|115379031\|ref\|ZP_01466159.1\| 5' adenylylsulfate APS reductase [Stigmatella aurantiaca DW4/3-1], g...	218.0	[0..1]	[235..11]
gi\|110548298, gi... - gi\|222053905\|ref\|YP_002536267.1\| adenylylsulfate reductase, thioredoxin dependent [Geobacter sp. FRC...	218.0	[0..13]	[235..7]
gi\|51457940 - gi\|51457940\|gb\|AAU03359.1\| adenylyl-sulfate reductase [Lycopersicon esculentum]	217.0	[0..4]	[234..87]
gi\|67851484, gi\|... - gi\|67873781\|ref\|ZP_00503768.1\| Phosphoadenosine phosphosulfate reductase CysH-type [Clostridium ther...	217.0	[0..1]	[235..1]
gi\|12831474 - gi\|12831474\|gb\|AAB05871.2\| PAPS-reductase-like protein [Catharanthus roseus]	215.0	[0..3]	[234..85]
gi\|88931570, gi\|... - gi\|88931570\|ref\|ZP_01137264.1\| Phosphoadenosine phosphosulfate reductase CysH-type:Adenylylsulfate r...	214.0	[0..3]	[233..5]
CYSH_PSEA8 - Phosphoadenosine phosphosulfate reductase OS=Pseudomonas aeruginosa (strain LESB58) GN=cysH PE=3 SV=... gi\|107101187 - gi\|107101187\|ref\|ZP_01365105.1\| hypothetical protein PaerPA_01002219 [Pseudomonas aeruginosa PACS2] gi\|126166782, gi... - gi\|254234851\|ref\|ZP_04928174.1\| 3'-phosphoadenosine-5'-phosphosulfate reductase [Pseudomonas aerugin... gi\|2072312 - gi\|2072312\|gb\|AAB53743.1\| CysH [Pseudomonas aeruginosa] gi\|194551083, gi... - gi\|84328077\|ref\|ZP_00976088.1\| COG0175: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS... CYSH_PSEAB - Phosphoadenosine phosphosulfate reductase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=cysH PE=3...	214.0	[0..1]	[233..24]

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Predicted Domain #1

Region A:
Residues: [1-235]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIEKHSSLP QIPENATPLE ILRIGIEAAG GAVSLACSFS VEDVIIIDLI TSHDLPVGIF  60
   61 AIDTGRLPEE THEVAEAIVS RYGVGIDWYF PRNDEVERLL RGKGPFSFRE SLVNRHQCCH 120
  121 IRKVEPLGRA LAGLAGWVTG VRRAHGVTRA NLAPLEIDDT NGGIVKINPL LDWTDSQVWA 180
  181 YAEARRLPVN RLHHQGYPSI GCAPCTRAVT PGQPPRSGRW WWEDPEHKEC GLHRR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	55.522879
Match:	2goyA
Description:	No description for 2goyA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits