YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39983484, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	300 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39983484, gi|....

Description	E-value	Query Range	Subject Range
gi\|45509996, gi\|... - gi\|75907072\|ref\|YP_321368.1\| glycosyl transferase family protein [Anabaena variabilis ATCC 29413], g...	151.0	[0..29]	[273..1]
gi\|17230554, gi\|... - gi\|17230554\|ref\|NP_487102.1\| hypothetical protein alr3062 [Nostoc sp. PCC 7120], gi\|17132156\|dbj\|BAB... gi\|25533868 - pir\|\|AG2188 hypothetical protein alr3062 [imported] - Nostoc sp. (strain PCC 7120)	145.0	[0..29]	[273..1]
gi\|18977731, gi\|... - gi\|18977731\|ref\|NP_579088.1\| glycosyl transferase [Pyrococcus furiosus DSM 3638], gi\|18893468\|gb\|AAL...	144.0	[0..32]	[300..5]
gi\|47558704, gi\|... - gi\|47564552\|ref\|ZP_00235597.1\| putative bi-functional transferase/deacetylase [Bacillus cereus G9241...	143.0	[0..6]	[294..730]
gi\|52142108, gi\|... - gi\|52142108\|ref\|YP_084722.1\| group-specific protein [Bacillus cereus E33L], gi\|51975577\|gb\|AAU17127....	142.0	[0..6]	[294..734]
ACSA1_KOMHA - Cellulose synthase 1 OS=Komagataeibacter hansenii GN=acsAB PE=1 SV=1 gi\|34392433 - gi\|34392433\|dbj\|BAC82543.1\| cellulose synthase subunit AB [Gluconacetobacter xylinus]	142.0	[0..1]	[294..120]
gi\|49478225, gi\|... - gi\|49478225\|ref\|YP_037525.1\| glycosyl transferase and polysaccharide deacetylase fusion [Bacillus th...	141.0	[0..6]	[294..730]
gi\|186464141, gi... - gi\|53688271\|ref\|ZP_00110167.2\| COG3210: Large exoproteins involved in heme utilization or adhesion [...	141.0	[0..30]	[292..3]

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Predicted Domain #1

Region A:
Residues: [1-300]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTALLQNLF SLFPFDLHGD CDVPPARDGI RVSCIINFYG RLNVLAGILW SLAQQDFPRS  60
   61 AFEVILVEDR GGSDEGRALA EEFSSRLPIV YAPLDKQYGL MGYSRNFGLE RSRGEFILFL 120
  121 DDDTIILQDD FLKTMVAYFD AQPGVSAIMP HGEASFAFVD DRYDFHDPFF MTSRCTAYRR 180
  181 TVLASLGGFM SSFIGQEDVE FVIRFHAAGN RCAAVPQLAY RHPPLYVTNL GKPMAVGSSF 240
  241 YGIRKRYPLV TWLLAVVNCS RHLPLVLAPS RKYREMGRFG LGFLWGVLTA PFRSGSLNYR 300
  301

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	29.69897
Match:	2d7iA
Description:	No description for 2d7iA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits