YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39983289, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	173 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39983289, gi|....

Description	E-value	Query Range	Subject Range
gi\|114637918 - gi\|114637918\|ref\|XP_001140124.1\| PREDICTED: similar to Ferritin heavy chain (Ferritin H subunit) (Pr...	193.0	[0..3]	[157..121]
gi\|47125326 - gi\|47125326\|gb\|AAH70494.1\| FTH1 protein [Homo sapiens]	191.0	[0..3]	[157..63]
gi\|83404987 - gi\|83404987\|gb\|AAI11079.1\| Fth1 protein [Rattus norvegicus]	188.0	[0..3]	[157..64]

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Predicted Domain #1

Region A:
Residues: [1-173]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNTEMAAAL NKHLNIELYS AQLYLSMSSY ANSMGLKGAA TWFMVQYQEE MLHFMKFYQY  60
   61 INSQGEHVTL GPIDAPPAEF ASLLQMFEKT LEHEMYITRC INDLTELAVR QKDHATQIFL 120
  121 QWFVTEQIEE EENDREIIGK LKLVGDNGYG LLMIDNELGV RVFTAPPVDG QAP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	39.39794
Match:	2jd60
Description:	No description for 2jd60 was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits