YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39996011, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	93 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39996011, gi|....

Description	E-value	Query Range	Subject Range
gi\|86605021 - gi\|86605021\|ref\|YP_473784.1\| MoaD family protein [Cyanobacteria bacterium Yellowstone A-Prime] gi\|86605021, gi\|... - gi\|86605021\|ref\|YP_473784.1\| MoaD family protein [Synechococcus sp. JA-3-3Ab], gi\|86553563\|gb\|ABC985...	102.0	[0..2]	[93..3]
gi\|18160633, gi\|... - gi\|18313123\|ref\|NP_559790.1\| hypothetical protein PAE2135 [Pyrobaculum aerophilum str. IM2], gi\|1816...	100.0	[0..2]	[93..3]
gi\|57642053, gi\|... - gi\|57642053\|ref\|YP_184531.1\| molybdopterin converting factor, subunit 1 [Thermococcus kodakarensis K...	100.0	[0..2]	[93..3]
gi\|52696120 - gi\|52696120\|pdb\|1VJK\|A Chain A, Putative Molybdopterin Converting Factor, Subunit 1 From Pyrococcus ...	99.0	[0..2]	[93..12]
gi\|86558784, gi\|... - gi\|86610242\|ref\|YP_479004.1\| MoaD family protein [Synechococcus sp. JA-2-3B'a(2-13)], gi\|86558784\|gb... gi\|86610242 - gi\|86610242\|ref\|YP_479004.1\| MoaD family protein [Cyanobacteria bacterium Yellowstone B-Prime]	99.0	[0..2]	[93..3]
gi\|18976915, gi\|... - gi\|18976915\|ref\|NP_578272.1\| molybdopterin converting factor, subunit 1 [Pyrococcus furiosus DSM 363...	99.0	[0..2]	[93..4]
gi\|37521630, gi\|... - gi\|37521630\|ref\|NP_925007.1\| hypothetical protein gsl2061 [Gloeobacter violaceus PCC 7421], gi\|35212...	98.0	[0..2]	[93..3]
gi\|22294706, gi\|... - gi\|22298526\|ref\|NP_681773.1\| hypothetical protein tsr0983 [Thermosynechococcus elongatus BP-1], gi\|2...	97.0	[0..2]	[93..3]
gi\|33356787 - gi\|33356787\|ref\|NP_127095.2\| molybdopterin converting factor, subunit 1 [Pyrococcus abyssi GE5]	96.0	[0..2]	[93..8]

Back

Predicted Domain #1

Region A:
Residues: [1-93]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVRFYSLL RLMLGREVVE LPWEAGETVR SLVQRAEQAV GSPLSRKLLD GDGVLHTGTI  60
   61 ILVNRRNIHH LEGLETPIRD GDTVALFPPG AGG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	19.221849
Match:	2g1eA
Description:	No description for 2g1eA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits