YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39982730, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	289 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39982730, gi|....

Description	E-value	Query Range	Subject Range
gi\|170715822, gi... - gi\|170715822\|gb\|EDT28004.1\| UTP-glucose-1-phosphate uridylyltransferase [Clostridium perfringens CPE... gi\|170712761, gi... - gi\|170712761\|gb\|EDT24943.1\| UTP-glucose-1-phosphate uridylyltransferase [Clostridium perfringens B s... gi\|18144169, gi\|... - gi\|18309492\|ref\|NP_561426.1\| UTP-glucose-1-phosphate uridylyltransferase [Clostridium perfringens st... gi\|110674009, gi... - gi\|110799362\|ref\|YP_694942.1\| UTP-glucose-1-phosphate uridylyltransferase [Clostridium perfringens A...	262.0	[0..2]	[285..4]
gi\|78043028, gi\|... - gi\|78043028\|ref\|YP_361375.1\| UTP-glucose-1-phosphate uridylyltransferase [Carboxydothermus hydrogeno...	261.0	[0..1]	[288..1]
gi\|77687043, gi\|... - gi\|77687043\|ref\|ZP_00802340.1\| UTP--glucose-1-phosphate uridylyltransferase, bacterial and archaeal ...	260.0	[0..1]	[288..1]
gi\|110684193, gi... - gi\|110803692\|ref\|YP_697798.1\| UTP-glucose-1-phosphate uridylyltransferase [Clostridium perfringens S...	260.0	[0..2]	[285..4]
gi\|25288612 - pir\|\|D84106 UTP-glucose-1-phosphate uridylyltransferase BH3652 [imported] - Bacillus halodurans (str... gi\|10176276, gi\|... - gi\|15616214\|ref\|NP_244519.1\| UTP-glucose-1-phosphate uridylyltransferase [Bacillus halodurans C-125]...	258.0	[0..1]	[288..1]
gi\|167620318 - gi\|167620318\|ref\|ZP_02388949.1\| UTP-glucose-1-phosphate uridylyltransferase [Burkholderia thailanden... gi\|167582161 - gi\|167582161\|ref\|ZP_02375035.1\| UTP-glucose-1-phosphate uridylyltransferase [Burkholderia thailanden... gi\|83654059, gi\|... - gi\|83720234\|ref\|YP_443149.1\| UTP-glucose-1-phosphate uridylyltransferase [Burkholderia thailandensis...	255.0	[0..2]	[283..3]
gi\|134138667, gi... - gi\|67547013\|ref\|ZP_00424921.1\| UTP--glucose-1-phosphate uridylyltransferase, bacterial and archaeal ...	255.0	[0..2]	[283..3]
gi\|251804630, gi... - gi\|251811833\|ref\|ZP_04826306.1\| UTP-glucose-1-phosphate uridylyltransferase [Staphylococcus epidermi... GTAB_STAEQ - UTP--glucose-1-phosphate uridylyltransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62... gi\|242232838, gi... - gi\|242243740\|ref\|ZP_04798184.1\| UTP-glucose-1-phosphate uridylyltransferase [Staphylococcus epidermi... GTAB_STAES - UTP--glucose-1-phosphate uridylyltransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gt...	254.0	[0..2]	[285..3]
gi\|149905893, gi... - gi\|82746082\|ref\|ZP_00908591.1\| UTP--glucose-1-phosphate uridylyltransferase, bacterial and archaeal ...	254.0	[0..1]	[283..1]

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Predicted Domain #1

Region A:
Residues: [1-289]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVKKAVFPV AGLGTRFLPA TKSSPKEMLP LIDKPLVQYV VEEAVASGIE QLLFVTGRSK  60
   61 RAIEDHFDIS FELEALLQEK GKDDMLQEVR EIADMVKIFY VRQKQALGLG HAILCAREFV 120
  121 GDEPFAVLLG DDIIDAEQPC LGQLLDVYRK YRGPVVALEK VPIEAISSYG CVKATGITDR 180
  181 IFEVTDLVEK PRREEAPSDM AIIGRYVLTP DIFPILERQT PGKGGEIQLT DALLTLSREE 240
  241 AIYGCLFKGK RHDCGDKLGF LKATVDMALK REEFNEEFRD YLREVLARG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	58.09691
Match:	2ux8A
Description:	No description for 2ux8A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits