| Protein: | PDRP_GEOSL |
| Organism: | Geobacter sulfurreducens PCA |
| Length: | 269 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PDRP_GEOSL.
| Description | E-value | Query Range |
Subject Range |
|
|
377.0 | [0..1] | [267..1] |
|
|
365.0 | [0..3] | [266..1] |
|
|
363.0 | [0..2] | [266..4] |
|
|
362.0 | [0..4] | [269..27] |
|
|
361.0 | [0..1] | [267..1] |
|
|
360.0 | [0..4] | [266..6] |
|
|
359.0 | [0..1] | [267..1] |
|
|
358.0 | [0..3] | [263..1] |
|
|
357.0 | [0..3] | [263..5] |
|
|
355.0 | [0..8] | [266..58] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MKRSIKHIYL LSDATGETVE RVVRAALSQF RDVEARFHRV TRIRSREDVI WALEEVLREP 60
61 GMVVYTLVDT ELAQLLRDEA EAHGLDAIDL ISPLLFKLSD FFGEAPQKEP
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.986 | 0.000 | ATP binding | c.78.2 | Aspartate/glutamate racemase |
|
Region A: Residues: [111-269] |
1 11 21 31 41 51
| | | | | |
1 GLLHQINSEY HKRVDAVDFT VKHDDGQDPR GLAKADFILV GVSRSSKTPL SMYLAHKGYK 60
61 VANVPIVKGI DPPPELYKVD QKRVVGLIID AERLVQIRTA RLRNLGQMPK GSYADYERIE 120
121 EELEFCRRLY RRNPQWLVID VTKKSVEESA AEIIQKLAG
|
| Detection Method: | |
| Confidence: | 0.972 |
| Match: | 1viaA |
| Description: | Crystal structure of shikimate kinase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.301700930786307 | bayes_pls_golite062009 |
| catalytic activity | 0.176212702885001 | bayes_pls_golite062009 |
