YRC Public Data Repository - Protein Structure Prediction

Protein:	NUOI1_GEOSL
Organism:	Geobacter sulfurreducens PCA
Length:	132 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUOI1_GEOSL.

Description	E-value	Query Range	Subject Range
NDS8A_ARATH - NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-A, mitochondrial OS=Arabidopsis thaliana GN=At...	140.0	[0..2]	[130..73]
NDUS8_TOBAC - NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial OS=Nicotiana tabacum PE=2 SV=1	139.0	[0..2]	[130..81]
gi\|77416915 - gi\|77416915\|gb\|ABA81853.1\| NADH:ubiquinone oxidoreductase-like [Solanum tuberosum]	139.0	[0..2]	[130..80]
gi\|157777422 - gi\|157777422\|ref\|XP_001666777.1\| hypothetical protein CBG24154 [Caenorhabditis briggsae AF16] gi\|187040443, gi... - gi\|39579869\|emb\|CAE56449.1\| Hypothetical protein CBG24154 [Caenorhabditis briggsae], gi\|187040443\|em...	137.0	[0..2]	[129..63]
CE00832 - Mitochondrial complex I 23K chain status:Confirmed UniProt:Q22619 protein_id:AAA50662.1	137.0	[0..2]	[129..63]
gi\|109463301, gi... - gi\|27661165\|ref\|XP_215197.1\| PREDICTED: similar to NADH dehydrogenase (ubiquinone) Fe-S protein 8 [R...	137.0	[0..1]	[129..61]
gi\|148225889, gi... - gi\|51593201\|gb\|AAH78569.1\| MGC85457 protein [Xenopus laevis], gi\|148225889\|ref\|NP_001087331.1\| MGC85...	137.0	[0..1]	[129..56]

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Predicted Domain #1

Region A:
Residues: [1-132]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMPLINGLK ITLKHMFMKP VTLQYPDERP TPSPNFRGLH ALKVSHDKAK CVACYLCPTV  60
   61 CPAKCITVEA GEDATHDKYA ERYEIDMLRC IFCGYCVEAC PVDALKMTGQ FELANYKRED 120
  121 FIFVKERLLE KK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	24.09691
Match:	2fug9
Description:	Crystal structure of the hydrophilic domain of respiratory complex I from Thermus thermophilus
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits