YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|39995131, gi\|...
Organism:	Geobacter sulfurreducens PCA
Length:	179 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|39995131, gi|....

Description	E-value	Query Range	Subject Range
gi\|71163438, gi\|... - gi\|71275860\|ref\|ZP_00652144.1\| transferase hexapeptide repeat [Xylella fastidiosa Dixon], gi\|7116343... gi\|71899356, gi\|... - gi\|71899356\|ref\|ZP_00681516.1\| transferase hexapeptide repeat [Xylella fastidiosa Ann-1], gi\|7173087...	165.0	[0..2]	[178..4]
gi\|182631530, gi... - gi\|182681420\|ref\|YP_001829580.1\| transferase [Xylella fastidiosa M23], gi\|182631530\|gb\|ACB92306.1\| t... gi\|28056818, gi\|... - gi\|28198727\|ref\|NP_779041.1\| transferase [Xylella fastidiosa Temecula1], gi\|28056818\|gb\|AAO28690.1\| ... gi\|22997601, gi\|... - gi\|71897945\|ref\|ZP_00680150.1\| transferase hexapeptide repeat [Xylella fastidiosa Ann-1], gi\|7173218...	162.0	[0..2]	[178..4]
gi\|11279163 - pir\|\|C82613 conserved hypothetical protein XF1984 [imported] - Xylella fastidiosa (strain 9a5c) gi\|15838578, gi\|... - gi\|9107095\|gb\|AAF84786.1\|AE004018_2 conserved hypothetical protein [Xylella fastidiosa 9a5c], gi\|158...	161.0	[0..2]	[178..4]
gi\|228747338, gi... - gi\|229013965\|ref\|ZP_04171090.1\| Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-li... gi\|163864684, gi... - gi\|89204251\|ref\|ZP_01182829.1\| transferase hexapeptide repeat [Bacillus weihenstephanensis KBAB4], g... gi\|228613991, gi... - gi\|229169492\|ref\|ZP_04297197.1\| Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-li...	160.0	[0..1]	[176..1]
gi\|21537242 - gi\|21537242\|gb\|AAM61583.1\| unknown [Arabidopsis thaliana]	159.0	[0..2]	[177..45]
gi\|78195983, gi\|... - gi\|78224728\|ref\|YP_386475.1\| hexapaptide repeat-containing transferase [Geobacter metallireducens GS...	158.0	[0..1]	[175..1]
gi\|152977121, gi... - gi\|89201246\|ref\|ZP_01179991.1\| transferase hexapeptide repeat [Bacillus cereus subsp. cytotoxis NVH ...	158.0	[0..1]	[176..1]
gi\|190560587, gi... - gi\|190568331\|ref\|ZP_03021239.1\| bacterial transferase family protein [Bacillus anthracis Tsiankovski... gi\|177651073, gi... - gi\|177651073\|ref\|ZP_02933904.1\| bacterial transferase family protein [Bacillus anthracis str. A0174]... gi\|218535108, gi... - gi\|218905991\|ref\|YP_002453825.1\| bacterial transferase family protein [Bacillus cereus AH820], gi\|21... gi\|195994255, gi... - gi\|196032826\|ref\|ZP_03100239.1\| bacterial transferase family protein [Bacillus cereus W], gi\|1959942... gi\|227003079, gi... - gi\|227817553\|ref\|YP_002817562.1\| bacterial transferase family protein [Bacillus anthracis str. CDC 6... gi\|228823618, gi... - gi\|228936071\|ref\|ZP_04098880.1\| Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-li... gi\|228811192, gi... - gi\|228948512\|ref\|ZP_04110793.1\| Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-li... gi\|228689548, gi... - gi\|229093869\|ref\|ZP_04224963.1\| Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-li... gi\|228659152, gi... - gi\|229124329\|ref\|ZP_04253519.1\| Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-li... gi\|229599976, gi... - gi\|229599976\|ref\|YP_002869036.1\| bacterial transferase family protein [Bacillus anthracis str. A0248... gi\|254687568 - gi\|254687568\|ref\|ZP_05151424.1\| bacterial transferase family protein [Bacillus anthracis str. CNEVA-... gi\|254736871 - gi\|254736871\|ref\|ZP_05194577.1\| bacterial transferase family protein [Bacillus anthracis str. Wester... gi\|254741906 - gi\|254741906\|ref\|ZP_05199593.1\| bacterial transferase family protein [Bacillus anthracis str. Kruger... gi\|254754496 - gi\|254754496\|ref\|ZP_05206531.1\| bacterial transferase family protein [Bacillus anthracis str. Vollum... gi\|254757329 - gi\|254757329\|ref\|ZP_05209356.1\| bacterial transferase family protein [Bacillus anthracis str. Austra... gi\|52140742, gi\|... - gi\|52140742\|ref\|YP_086086.1\| transferase; acetyltransferase/acyltransferase [Bacillus cereus E33L], ... gi\|165869829, gi... - gi\|165869829\|ref\|ZP_02214487.1\| bacterial transferase family protein [Bacillus anthracis str. A0488]... gi\|47530313, gi\|... - gi\|47530313\|ref\|YP_021662.1\| transferase family protein [Bacillus anthracis str. 'Ames Ancestor'], g... gi\|167514000, gi... - gi\|167638183\|ref\|ZP_02396461.1\| bacterial transferase family protein [Bacillus anthracis str. A0193]... gi\|49187646, gi\|... - gi\|49187646\|ref\|YP_030899.1\| transferase family protein [Bacillus anthracis str. Sterne], gi\|4918157... gi\|167530800, gi... - gi\|167633999\|ref\|ZP_02392322.1\| bacterial transferase family protein [Bacillus anthracis str. A0442]... gi\|21402805, gi\|... - gi\|65322128\|ref\|ZP_00395087.1\| COG0663: Carbonic anhydrases/acetyltransferases, isoleucine patch sup... gi\|170705498, gi... - gi\|170705498\|ref\|ZP_02895962.1\| bacterial transferase family protein [Bacillus anthracis str. A0389]... gi\|30259502, gi\|... - gi\|30264827\|ref\|NP_847204.1\| transferase family protein [Bacillus anthracis str. Ames], gi\|30259502\|... gi\|170670158, gi... - gi\|170685694\|ref\|ZP_02876917.1\| bacterial transferase family protein [Bacillus anthracis str. A0465]...	158.0	[0..1]	[176..1]
gi\|49332276, gi\|... - gi\|49480720\|ref\|YP_038805.1\| transferase; acetyltransferase/acyltransferase [Bacillus thuringiensis ... gi\|222098232, gi... - gi\|222098232\|ref\|YP_002532289.1\| transferase; possible acetyltransferase/acyltransferase [Bacillus c... gi\|217962249, gi... - gi\|217962249\|ref\|YP_002340819.1\| bacterial transferase family protein [Bacillus cereus AH187], gi\|21... gi\|206977354, gi... - gi\|206977354\|ref\|ZP_03238251.1\| bacterial transferase family protein [Bacillus cereus H3081.97], gi\|... gi\|228625090, gi... - gi\|229158372\|ref\|ZP_04286436.1\| Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-li... gi\|229141496, gi... - gi\|229141496\|ref\|ZP_04270032.1\| Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-li... gi\|228988016, gi... - gi\|228988016\|ref\|ZP_04148119.1\| Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-li...	157.0	[0..1]	[176..1]

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Predicted Domain #1

Region A:
Residues: [1-179]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRPFKGMSP QIDPSAFIAD TAVVIGDVTI GPESSIWYNV VARGDVNFIR IGARSNIQDL  60
   61 SMLHVTHKKH ADDPGAPLVI GDDVTVGHSV TLHGCTIGNG AFIGMQAMVM DKAVVGEGAL 120
  121 VGARALVTEG TVIPPHTLWV GAPAKYKRDL TPDEIAWLKR SAGNYVRYSR EYLEEDADR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	38.69897
Match:	2eg0A
Description:	No description for 2eg0A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits