YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|34483977
Organism: Wolinella succinogenes
Length: 178 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34483977.

Description E-value Query
Range
Subject
Range
gi|118413733, gi... - gi|86154408|ref|ZP_01072576.1| Flagellar basal body-associated protein FliL [Campylobacter fetus sub...
150.0 [0..1] [178..1]

Back

Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADENKETAQ AEGKKNKLII FIIAGVIALL LIIGGVVVYF MLSSNPEPQA ASAQASQSTS  60
   61 GGAKAGGASR SGGGNFLSVG PMYALDQFIV NLTTQSGRRY LKTSINVELS QPNLTAELDT 120
  121 KRAVIRDTVI SILSSKSIEE ISTMKGKEKL KEELIERLNE FLVDGRIVNL FFTDFVVQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 30.886057
Match: PF03748.5
Description: No description for PF03748.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.711 N/A N/A d.96.1 Tetrahydrobiopterin biosynthesis enzymes-like
View Download 0.691 N/A N/A d.43.1 Elongation factor Ts (EF-Ts), dimerisation domain
View Download 0.632 N/A N/A d.110.4 SNARE-like
View Download 0.630 N/A N/A f.18.1 F1F0 ATP synthase subunit A
View Download 0.619 N/A N/A d.96.1 Tetrahydrobiopterin biosynthesis enzymes-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle