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View Structure Prediction Details

Protein: gi|34557541
Organism: Wolinella succinogenes DSM 1740
Length: 214 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34557541.

Description E-value Query
Range
Subject
Range
gi|78042813, gi|... - gi|78042813|ref|YP_360548.1| FMN reductase, NADPH-dependent [Carboxydothermus hydrogenoformans Z-290...
180.0 [0..1] [214..1]

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Predicted Domain #1
Region A:
Residues: [1-214]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVVAINGSP KSNGNTAQMI DIITDELNQE GIETEVLHVG NKMIRGCFGC GACYKNQDER  60
   61 CIAKEDDSFV NECIQKMKEA EGLILASPVH WAGIAGAMKS FLDRVFYVSS ANGNLFRHKV 120
  121 GASVVAVRRS GGVTTFDQLN HYLTYAEMFM PTTNYWNVGH GRIPGEVHED AEGVQIARVL 180
  181 GKNMALTLKM VQNAKEHHLV FPEKEAKIMT NFVR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.522879
Match: 2fzvA
Description: Crystal Structure of an apo form of a Flavin-binding Protein from Shigella flexneri
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.275631658558537 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle