YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|34556761
Organism:	Wolinella succinogenes DSM 1740
Length:	79 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34556761.

Description	E-value	Query Range	Subject Range
gi\|25505286 - pir\|\|F95302 FixS2 nitrogen fixation protein [imported] - Sinorhizobium meliloti (strain 1021) magapl... gi\|14523410, gi\|... - gi\|16262779\|ref\|NP_435572.1\| FixS2 nitrogen fixation protein [Sinorhizobium meliloti 1021], gi\|14523...	101.0	[0..3]	[73..1]

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Predicted Domain #1

Region A:
Residues: [1-79]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSGMVGVML GVSVFIGFLG LVAFLWGLRS GQFDDEKKMM QGVLFDGEEE LQEAALIDKK  60
   61 KREMKREPSM KENNNGGEA

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	16.508638
Match:	PF03597.6
Description:	No description for PF03597.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits