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View Structure Prediction Details

Protein: gi|30689066, gi|...
Organism: Arabidopsis thaliana
Length: 687 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30689066, gi|....

Description E-value Query
Range
Subject
Range
gi|22654981, gi|... - gi|28416523|gb|AAO42792.1| AT4g31540/F3L17_110 [Arabidopsis thaliana], gi|22654981|gb|AAM98083.1| AT...
777.0 [0..1] [687..1]

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Predicted Domain #1
Region A:
Residues: [1-69]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAESTGVDR GIQSLIAARK SLKLSLEKSK AIGLALGKTG PRFDEIEQRL PLLEAAVRPI  60
   61 RADGEALKD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [70-687]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGGNINRAVG PAAAVLKVFD AVHGLEKSLL SDPKNDLSSY LSVLKRLEEA LKFLGENCGL  60
   61 AIQWLEDIVE YLDDHHVADE KYLSNLKKSL RGLSEFHNDR GGGEEKERSQ LRLDGGLRNA 120
  121 ALDKLENEFR RLLKDNSVPL PMASPSSLGD QACIAPSQLP VTVIHKLQAI LGRLRANNRL 180
  181 DKCISIYVEV RSLNVRASLQ ALDLDYLDIS VSEFNDVQSI EGYIAQWGNH LEFAVKHLFE 240
  241 AEFKLCNDVF ERLGLNVWMD CFSKIAAQAG MLAFLQFGKT VTDSKKDPIK LLKLLDIFTS 300
  301 LNKLRADFNR LFGGAACIEI QNFTRDLIKR IIDGAAEIFW ELLVQVEIQK QTPPPSDGGV 360
  361 PRLVSFVTDY CNKLIGDKYK STLTQVLLIH KSWRSERFQD NQLMVEVLRI IKAIEQNLDV 420
  421 WMKAYPDQTL AHFFGMNNHW HLYKNLKGTN IGDHLGDSWL KEHDQYKEYY ATVFLRDSWG 480
  481 KLPSHLSREG LILFSGGHAT ARDLVKKRLK AFNDAFDEMY KKQASWVLPE KDLRDRVCQQ 540
  541 IVQAIVPVYR SYMQNYGPLV EKDASSSKYV RYTVVALEKI LSSLYMPKPM RYGSFKGTPP 600
  601 SEKFKNDVDL RRTTSAVV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.045757
Match: 2pftA
Description: No description for 2pftA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle