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View Structure Prediction Details

Protein: AROK_COXBU
Organism: Coxiella burnetii RSA 493
Length: 179 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AROK_COXBU.

Description E-value Query
Range
Subject
Range
AROK_PSYWF - Shikimate kinase OS=Psychrobacter sp. (strain PRwf-1) GN=aroK PE=3 SV=1
152.0 [0..1] [178..1]
AROK_RALSO - Shikimate kinase OS=Ralstonia solanacearum GN=aroK PE=3 SV=1
AROK_RALSO - Shikimate kinase OS=Ralstonia solanacearum (strain GMI1000) GN=aroK PE=3 SV=1
151.0 [0..7] [173..5]
gi|76810842, gi|... - gi|76810842|ref|YP_335093.1| shikimate kinase [Burkholderia pseudomallei 1710b], gi|76580295|gb|ABA4...
149.0 [0..2] [173..19]
gi|83719637, gi|... - gi|83719637|ref|YP_443528.1| shikimate kinase [Burkholderia thailandensis E264], gi|83653462|gb|ABC3...
149.0 [0..2] [173..19]
AROK_CUPPJ - Shikimate kinase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=aroK PE=3 SV=1
148.0 [0..1] [173..1]
gi|94312198, gi|... - gi|94312198|ref|YP_585408.1| shikimate kinase [Ralstonia metallidurans CH34], gi|93356050|gb|ABF1013...
148.0 [0..6] [173..36]
gi|67663370, gi|... - gi|67663370|ref|ZP_00460653.1| Shikimate kinase [Burkholderia cenocepacia HI2424], gi|67103213|gb|EA...
147.0 [0..2] [173..10]
AROK_PSYAR - Shikimate kinase - Psychrobacter arcticum
AROK_PSYA2 - Shikimate kinase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=aroK PE=3 SV=1
147.0 [0..1] [175..1]
AROK_VIBPA - Shikimate kinase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=aroK PE=3 SV=1
AROK_VIBPA - Shikimate kinase OS=Vibrio parahaemolyticus GN=aroK PE=3 SV=1
gi|91227283, gi|... - gi|91227283|ref|ZP_01261708.1| shikimate kinase I [Vibrio alginolyticus 12G01], gi|91188677|gb|EAS74...
147.0 [0..4] [175..3]
AROK_PSYCK - Shikimate kinase OS=Psychrobacter cryohalolentis (strain K5) GN=aroK PE=3 SV=1
146.0 [0..1] [175..1]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNLTNIYL IGLMGAGKTS VGSQLAKLTK RILYDSDKEI EKRTGADIAW IFEMEGEAGF  60
   61 RRREREMIEA LCKLDNIILA TGGGVVLDEK NRQQISETGV VIYLTASIDT QLKRIGQKGE 120
  121 MRRPLFIKNN SKEKLQQLNE IRKPLYQAMA DLVYPTDDLN PRQLATQILV DIKQTYSDL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.69897
Match: 1kagA
Description: Shikimate kinase (AroK)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.37148167194523 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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