YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29542425, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	201 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29542425, gi|....

Description	E-value	Query Range	Subject Range
gi\|2983181, gi\|1... - gi\|2983181\|gb\|AAC06781.1\| anthranilate synthase component II [Aquifex aeolicus VF5], gi\|15606008\|ref... gi\|7436747 - pir\|\|E70349 anthranilate synthase component II - Aquifex aeolicus	229.0	[0..2]	[193..3]
gi\|255662132, gi... - gi\|83720076\|ref\|YP_443417.1\| anthranilate synthase component II [Burkholderia thailandensis E264], g... gi\|167582462 - gi\|167582462\|ref\|ZP_02375336.1\| anthranilate synthase component II [Burkholderia thailandensis TXDOH...	223.0	[0..1]	[194..1]
gi\|197938528, gi... - gi\|198244012\|ref\|YP_002217430.1\| aminodeoxychorismate synthase, component II [Salmonella enterica su... gi\|197265499, gi... - gi\|197265499\|ref\|ZP_03165573.1\| aminodeoxychorismate synthase, component II [Salmonella enterica sub... gi\|197247694, gi... - gi\|197247694\|ref\|YP_002148388.1\| aminodeoxychorismate synthase, component II [Salmonella enterica su... PABA_SALTY - Aminodeoxychorismate synthase component 2 OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 70... gi\|167994569, gi... - gi\|205327603\|gb\|EDZ14367.1\| aminodeoxychorismate synthase, component II [Salmonella enterica subsp. ... PABA_SALTY - Para-aminobenzoate synthase glutamine amidotransferase component II OS=Salmonella typhimurium GN=pab... gi\|207858710, gi... - gi\|207858710\|ref\|YP_002245361.1\| para-aminobenzoate synthase component II [Salmonella enterica subsp... lcl\|NC_016856.1_... - [gene=pabA] [protein=para-aminobenzoate synthase component II] [protein_id=YP_005239662.1] [location... PABA_SALTY - Para-aminobenzoate synthase glutamine amidotransferase component II OS=Salmonella typhimurium GN=pab...	223.0	[0..1]	[187..1]
gi\|218691642, gi... - gi\|218691642\|ref\|YP_002399854.1\| para-aminobenzoate synthase component II [Escherichia coli ED1a], g... gi\|91212837, gi\|... - gi\|91212837\|ref\|YP_542823.1\| para-aminobenzoate synthase component II [Escherichia coli UTI89], gi\|9... gi\|227839375, gi... - gi\|227883496\|ref\|ZP_04001301.1\| para-aminobenzoate synthase component II [Escherichia coli 83972], g... gi\|226902357, gi... - gi\|237703093\|ref\|ZP_04533574.1\| para-aminobenzoate synthase glutamine amidotransferase component II ... gi\|115514760, gi... - gi\|117625636\|ref\|YP_858959.1\| para-aminobenzoate synthase component II [Escherichia coli APEC O1], g... gi\|191171529, gi... - gi\|75241543\|ref\|ZP_00725388.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Esch... gi\|110643600, gi... - gi\|110643600\|ref\|YP_671330.1\| para-aminobenzoate synthase component II [Escherichia coli 536], gi\|11... gi\|218367192, gi... - gi\|218560423\|ref\|YP_002393336.1\| para-aminobenzoate synthase component II [Escherichia coli S88], gi... gi\|26249959, gi\|... - gi\|26249959\|ref\|NP_755999.1\| para-aminobenzoate synthase component II [Escherichia coli CFT073], gi\|...	223.0	[0..1]	[187..1]
gi\|83311960, gi\|... - gi\|83311960\|ref\|YP_422224.1\| anthranilate/para-aminobenzoate synthase component II [Magnetospirillum...	223.0	[0..1]	[194..1]
gi\|53720660, gi\|... - gi\|53720660\|ref\|YP_109646.1\| anthranilate synthase component II [Burkholderia pseudomallei K96243], ... gi\|52423503, gi\|... - gi\|53717533\|ref\|YP_105300.1\| anthranilate synthase component II [Burkholderia mallei ATCC 23344], gi... gi\|100059030, gi... - gi\|67753036\|ref\|ZP_00491986.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|100120595, gi... - gi\|67758516\|ref\|ZP_00497279.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|134245350, gi... - gi\|134283155\|ref\|ZP_01769856.1\| anthranilate synthase component II [Burkholderia pseudomallei 305], ... gi\|67647446, gi\|... - gi\|67647446\|ref\|ZP_00445688.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|121224943, gi... - gi\|84520602\|ref\|ZP_01007739.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|76810520, gi\|... - gi\|76810520\|ref\|YP_334941.1\| anthranilate synthase component II [Burkholderia pseudomallei 1710b], g... gi\|85063547 - gi\|85063547\|ref\|ZP_01024401.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|237813947, gi... - gi\|237813947\|ref\|YP_002898398.1\| para-aminobenzoate/anthranilate synthase glutamine amidotransferase... gi\|100263674, gi... - gi\|87314580\|ref\|ZP_01095622.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|225934971, gi... - gi\|226193001\|ref\|ZP_03788612.1\| anthranilate synthase component II [Burkholderia pseudomallei Pakist... gi\|147751290, gi... - gi\|83622933\|ref\|ZP_00933222.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|167721371 - gi\|167721371\|ref\|ZP_02404607.1\| anthranilate synthase component II [Burkholderia pseudomallei DM98] gi\|83676708, gi\|... - gi\|83676708\|ref\|ZP_00938481.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|167740340 - gi\|167740340\|ref\|ZP_02413114.1\| anthranilate synthase component II [Burkholderia pseudomallei 14] gi\|161358421, gi... - gi\|82534806\|ref\|ZP_00893833.1\| hypothetical protein Bpse110_02003882 [Burkholderia pseudomallei 1106... gi\|194522302, gi... - gi\|83618251\|ref\|ZP_00928718.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|167003485, gi... - gi\|243060999\|gb\|EES43185.1\| anthranilate synthase component II [Burkholderia mallei PRL-20], gi\|1670... gi\|184211058, gi... - gi\|99908085\|ref\|ZP_01315859.1\| hypothetical protein Bpse1_03004801 [Burkholderia pseudomallei 1655],... gi\|167847444 - gi\|167847444\|ref\|ZP_02472952.1\| anthranilate synthase component II [Burkholderia pseudomallei B7210] gi\|67680877, gi\|... - gi\|90290489\|ref\|ZP_01210145.1\| hypothetical protein Bpse17_02004810 [Burkholderia pseudomallei 1710a... gi\|167896032 - gi\|167896032\|ref\|ZP_02483434.1\| anthranilate synthase component II [Burkholderia pseudomallei 7894] gi\|100914236, gi... - gi\|67634652\|ref\|ZP_00433621.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|167817557 - gi\|167817557\|ref\|ZP_02449237.1\| anthranilate synthase component II [Burkholderia pseudomallei 91] gi\|238520942, gi... - gi\|67640250\|ref\|ZP_00439064.1\| anthranilate synthase component II [Burkholderia mallei GB8 horse 4],... gi\|167825959 - gi\|167825959\|ref\|ZP_02457430.1\| anthranilate synthase component II [Burkholderia pseudomallei 9] gi\|126452687, gi... - gi\|82529903\|ref\|ZP_00889142.1\| COG0512: Anthranilate/para-aminobenzoate synthases component II [Burk... gi\|124290705, gi... - gi\|124382685\|ref\|YP_001024750.1\| anthranilate synthase component II [Burkholderia mallei NCTC 10229]... gi\|167920646 - gi\|167920646\|ref\|ZP_02507737.1\| anthranilate synthase component II [Burkholderia pseudomallei BCC215... gi\|160696836, gi... - gi\|254175793\|ref\|ZP_04882452.1\| anthranilate synthase component II [Burkholderia mallei ATCC 10399],... gi\|167904418 - gi\|167904418\|ref\|ZP_02491623.1\| anthranilate synthase component II [Burkholderia pseudomallei NCTC 1... gi\|167912680 - gi\|167912680\|ref\|ZP_02499771.1\| anthranilate synthase component II [Burkholderia pseudomallei 112] gi\|217392273, gi... - gi\|217424817\|ref\|ZP_03456314.1\| anthranilate synthase component II [Burkholderia pseudomallei 576], ...	222.0	[0..1]	[194..1]
gi\|82778641, gi\|... - gi\|82778641\|ref\|YP_404990.1\| para-aminobenzoate synthase component II [Shigella dysenteriae Sd197], ...	222.0	[0..1]	[187..1]
gi\|204322280, gi... - gi\|204928847\|ref\|ZP_03220046.1\| aminodeoxychorismate synthase, component II [Salmonella enterica sub... gi\|213053379 - gi\|213053379\|ref\|ZP_03346257.1\| para-aminobenzoate synthase component II [Salmonella enterica subsp.... gi\|238913593 - gi\|238913593\|ref\|ZP_04657430.1\| para-aminobenzoate synthase component II [Salmonella enterica subsp.... gi\|213426760 - gi\|213426760\|ref\|ZP_03359510.1\| para-aminobenzoate synthase component II [Salmonella enterica subsp.... gi\|213581580 - gi\|213581580\|ref\|ZP_03363406.1\| para-aminobenzoate synthase component II [Salmonella enterica subsp.... gi\|205333159, gi... - gi\|205333159\|gb\|EDZ19923.1\| aminodeoxychorismate synthase, component II [Salmonella enterica subsp. ... gi\|197291379, gi... - gi\|197291379\|gb\|EDY30731.1\| aminodeoxychorismate synthase, component II [Salmonella enterica subsp. ... gi\|194455231, gi... - gi\|194468867\|ref\|ZP_03074851.1\| aminodeoxychorismate synthase, component II [Salmonella enterica sub... gi\|194737562, gi... - gi\|194737562\|ref\|YP_002116412.1\| aminodeoxychorismate synthase, component II [Salmonella enterica su... gi\|16505122, gi\|... - gi\|25291375\|pir\|\|AD1002 para-aminobenzoate synthase, glutamine amidotransferase component II (EC 4.1... gi\|29139940, gi\|... - gi\|29144303\|ref\|NP_807645.1\| para-aminobenzoate synthase component II [Salmonella enterica subsp. en... gi\|16762816 - gi\|16762816\|ref\|NP_458433.1\| para-aminobenzoate synthase component II [Salmonella enterica subsp. en... gi\|213864793 - gi\|213864793\|ref\|ZP_03386912.1\| para-aminobenzoate synthase component II [Salmonella enterica subsp.... gi\|213976486 - gi\|213976486\|ref\|ZP_03403745.1\| para-aminobenzoate synthase component II [Salmonella enterica subsp.... gi\|214000206 - gi\|214000206\|ref\|ZP_03410941.1\| para-aminobenzoate synthase component II [Salmonella enterica subsp....	222.0	[0..1]	[187..1]
gi\|217324460, gi... - gi\|217324460\|ref\|ZP_03440544.1\| aminodeoxychorismate synthase, component II [Escherichia coli O157:H... gi\|208812957, gi... - gi\|208812957\|ref\|ZP_03254286.1\| aminodeoxychorismate synthase, component II [Escherichia coli O157:H... gi\|208729357, gi... - gi\|208809556\|ref\|ZP_03251893.1\| aminodeoxychorismate synthase, component II [Escherichia coli O157:H... gi\|209157464, gi... - gi\|209396064\|ref\|YP_002272802.1\| aminodeoxychorismate synthase, component II [Escherichia coli O157:... gi\|208821415, gi... - gi\|208821415\|ref\|ZP_03261735.1\| aminodeoxychorismate synthase, component II [Escherichia coli O157:H... gi\|13363684, gi\|... - gi\|15833465\|ref\|NP_312238.1\| para-aminobenzoate synthase component II [Escherichia coli O157:H7], gi... gi\|168785170, gi... - gi\|189374309\|gb\|EDU92725.1\| aminodeoxychorismate synthase, component II [Escherichia coli O157:H7 st... gi\|209756822, gi... - pir\|\|H86000 p-aminobenzoate synthetase, component II [imported] - Escherichia coli (strain O157:H7, ... gi\|189002404, gi... - gi\|189002404\|gb\|EDU71390.1\| aminodeoxychorismate synthase, component II [Escherichia coli O157:H7 st... gi\|195934858 - gi\|195934858\|ref\|ZP_03080240.1\| para-aminobenzoate synthase component II [Escherichia coli O157:H7 s... gi\|15803874, gi\|... - gi\|15803874\|ref\|NP_289908.1\| para-aminobenzoate synthase component II [Escherichia coli O157:H7 EDL9... gi\|189380149, gi... - gi\|189380149\|gb\|EDU98565.1\| aminodeoxychorismate synthase, component II [Escherichia coli O157:H7 st... gi\|189369905, gi... - gi\|189369905\|gb\|EDU88321.1\| aminodeoxychorismate synthase, component II [Escherichia coli O157:H7 st... gi\|189359113, gi... - gi\|189359113\|gb\|EDU77532.1\| aminodeoxychorismate synthase, component II [Escherichia coli O157:H7 st... gi\|168772742, gi... - gi\|187771712\|gb\|EDU35556.1\| aminodeoxychorismate synthase, component II [Escherichia coli O157:H7 st... gi\|168765713, gi... - gi\|189364793\|gb\|EDU83212.1\| aminodeoxychorismate synthase, component II [Escherichia coli O157:H7 st... gi\|188014202, gi... - gi\|188014202\|gb\|EDU52324.1\| aminodeoxychorismate synthase, component II [Escherichia coli O157:H7 st... gi\|254795284, gi... - gi\|254795284\|ref\|YP_003080121.1\| aminodeoxychorismate synthase, subunit II [Escherichia coli O157:H7... gi\|13363684, gi\|... - gi\|15833465\|ref\|NP_312238.1\| para-aminobenzoate synthase component II [Escherichia coli O157:H7 str....	222.0	[0..1]	[187..1]
gi\|56477813, gi\|... - gi\|56477813\|ref\|YP_159402.1\| anthranilate synthase (component II) [Aromatoleum aromaticum EbN1], gi\|...	222.0	[0..1]	[187..1]

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Predicted Domain #1

Region A:
Residues: [1-201]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLMIDNYDS FTYNLARYFE ELGAAVSVYF NDKISLADIA ALNPKQIVIS PGPGRPEEAG  60
   61 ITLPMIKAFS GKIPLLGICL GHQAIAQAFG AKIVLAEKIM HGKTSIIHHS GKGVFNGIND 120
  121 SFVATRYHSL IIERESLPAE FEITAWTNPN QEIMGIRHAH HSLEGVQFHP ESVLTQHGHR 180
  181 LLKNFLNPIS QRGHHLCLKS H

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	43.69897
Match:	1qdlB
Description:	Anthranilate synthase GAT subunit, TrpG
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
4-amino-4-deoxychorismate synthase activity	4.48164623771604	bayes_pls_golite062009
anthranilate synthase activity	2.51214170411838	bayes_pls_golite062009
ligase activity	1.77692713123297	bayes_pls_golite062009
oxo-acid-lyase activity	1.35896725827905	bayes_pls_golite062009
catalytic activity	1.30391542469987	bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds	0.628648036096965	bayes_pls_golite062009
imidazoleglycerol-phosphate synthase activity	0.270391651600004	bayes_pls_golite062009
carbon-carbon lyase activity	0.0769356405014503	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: