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View Structure Prediction Details

Protein: SSPA_COXBU
Organism: Coxiella burnetii RSA 493
Length: 209 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SSPA_COXBU.

Description E-value Query
Range
Subject
Range
gi|2052029, gi|7... - pir||T07156 probable glutathione transferase (EC 2.5.1.18) - soybean, gi|2052029|emb|CAA71784.1| glu...
189.0 [0..1] [209..1]
gi|17385642 - gi|17385642|dbj|BAB32446.2| glutathione S-transferase [Matricaria chamomilla]
187.0 [0..2] [206..1]
gi|8052535 - gi|8052535|gb|AAF71799.1|AC013430_8 F3F9.13 [Arabidopsis thaliana]
182.0 [0..1] [209..1]
gi|27447206 - gi|27447206|gb|AAL92873.1| glutathione S-transferase-like protein [Lycopersicon esculentum]
176.0 [0..1] [207..1]
GSTX4_TOBAC - Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1
174.0 [0..2] [207..1]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKRSIMTLY SGPLDIYSHQ VRIVLAEKGV TVDIHNVDAN HPSEDLIELN PYATLPTLVD  60
   61 RDLVLFESRV IMEYLDERFP HPPLLPVYPV ARSRCRLLMY RIERNFYHSM KIIEEGTPKQ 120
  121 AETEREFLTK ELIELDPVFG EKTYFMNDDF TLVDCVMAPL LWRLPHLGVH VPPRAAKSMY 180
  181 KYKKLIFERE SFKASLSESE SELREVDGI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.0
Match: 1yy7A
Description: Crystal structure of stringent starvation protein A (SspA), an RNA polymerase-associated transcription factor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle