YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29654299, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	258 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29654299, gi|....

Description	E-value	Query Range	Subject Range
gi\|238727246, gi... - gi\|77978861\|ref\|ZP_00834285.1\| COG0362: 6-phosphogluconate dehydrogenase [Yersinia intermedia ATCC 2...	164.0	[0..5]	[252..2]
gi\|78512361, gi\|... - gi\|78699737\|ref\|ZP_00864226.1\| Prephenate dehydrogenase [Bradyrhizobium sp. BTAi1], gi\|78512361\|gb\|E...	162.0	[0..8]	[257..9]
gi\|165912483, gi... - gi\|89105299\|ref\|ZP_01177821.1\| COG0362: 6-phosphogluconate dehydrogenase [Yersinia pestis biovar Ori... gi\|229679904, gi... - gi\|229902994\|ref\|ZP_04518110.1\| gluconate-6-phosphate dehydrogenase, decarboxylating [Yersinia pesti... gi\|166960194, gi... - gi\|167421709\|ref\|ZP_02313462.1\| 6-phosphogluconate dehydrogenase, decarboxylating [Yersinia pestis b... gi\|166211549, gi... - gi\|166211549\|ref\|ZP_02237584.1\| 6-phosphogluconate dehydrogenase, decarboxylating [Yersinia pestis b... gi\|169751294, gi... - gi\|170024760\|ref\|YP_001721265.1\| 6-phosphogluconate dehydrogenase [Yersinia pseudotuberculosis YPIII... gi\|167423935, gi... - gi\|167423935\|ref\|ZP_02315688.1\| 6-phosphogluconate dehydrogenase, decarboxylating [Yersinia pestis b... gi\|186894977, gi... - gi\|186894977\|ref\|YP_001872089.1\| 6-phosphogluconate dehydrogenase [Yersinia pseudotuberculosis PB1/+... Q66C57\|Q66C57_YERPS - 6-phosphogluconate dehydrogenase, decarboxylating - Yersinia pseudotuberculosis gi\|51595890, gi\|... - gi\|51595890\|ref\|YP_070081.1\| 6-phosphogluconate dehydrogenase [Yersinia pseudotuberculosis IP 32953]... gi\|25283717 - pir\|\|AI0187 phosphogluconate dehydrogenase (decarboxylating) (EC 1.1.1.44) [imported] - Yersinia pes... gi\|149290836, gi... - gi\|149366462\|ref\|ZP_01888496.1\| 6-phosphogluconate dehydrogenase, decarboxylating [Yersinia pestis C... gi\|165991742, gi... - gi\|166009187\|ref\|ZP_02230085.1\| 6-phosphogluconate dehydrogenase, decarboxylating [Yersinia pestis b... gi\|16121814, gi\|... - gi\|218928682\|ref\|YP_002346557.1\| 6-phosphogluconate dehydrogenase [Yersinia pestis CO92], gi\|1612181... gi\|145210415, gi... - gi\|145598719\|ref\|YP_001162795.1\| 6-phosphogluconate dehydrogenase [Yersinia pestis Pestoides F], gi\|... gi\|165924377, gi... - gi\|165924377\|ref\|ZP_02220209.1\| 6-phosphogluconate dehydrogenase, decarboxylating [Yersinia pestis b... gi\|229841523, gi... - gi\|229841523\|ref\|ZP_04461682.1\| gluconate-6-phosphate dehydrogenase, decarboxylating [Yersinia pesti... gi\|229689242, gi... - gi\|229843634\|ref\|ZP_04463777.1\| gluconate-6-phosphate dehydrogenase, decarboxylating [Yersinia pesti... gi\|229703662, gi... - gi\|229894264\|ref\|ZP_04509447.1\| gluconate-6-phosphate dehydrogenase, decarboxylating [Yersinia pesti... gi\|117674002, gi... - gi\|77628771\|ref\|ZP_00791357.1\| COG0362: 6-phosphogluconate dehydrogenase [Yersinia pseudotuberculosi...	161.0	[0..5]	[252..2]
gi\|77636293, gi\|... - gi\|77636293\|ref\|ZP_00798368.1\| COG0362: 6-phosphogluconate dehydrogenase [Yersinia pestis Angola], g...	161.0	[0..5]	[252..2]
gi\|23097640, gi\|... - gi\|23097640\|ref\|NP_691106.1\| 6-phosphogluconate dehydrogenase [Oceanobacillus iheyensis HTE831], gi\|...	161.0	[0..5]	[236..1]
gi\|90335568, gi\|... - gi\|90420234\|ref\|ZP_01228142.1\| prephenate/hexadienyl dehydrogenase [Aurantimonas sp. SI85-9A1], gi\|9... gi\|90335568, gi\|... - gi\|90420234\|ref\|ZP_01228142.1\| prephenate/hexadienyl dehydrogenase [Aurantimonas sp. SI85-9A1], gi\|9...	160.0	[0..1]	[252..1]
gi\|108778746, gi... - gi\|108806833\|ref\|YP_650749.1\| 6-phosphogluconate dehydrogenase [Yersinia pestis Antiqua], gi\|1087787... gi\|167050152, gi... - gi\|167400203\|ref\|ZP_02305716.1\| 6-phosphogluconate dehydrogenase, decarboxylating [Yersinia pestis b...	160.0	[0..5]	[252..2]
gi\|13473052, gi\|... - gi\|14023800\|dbj\|BAB50405.1\| cyclohexadienyl dehydrogenase [Mesorhizobium loti MAFF303099], gi\|134730...	160.0	[0..1]	[252..1]
gi\|22126509, gi\|... - gi\|22126509\|ref\|NP_669932.1\| 6-phosphogluconate dehydrogenase [Yersinia pestis KIM], gi\|21959506\|gb\|...	160.0	[0..5]	[252..19]
gi\|46019536 - gi\|46019536\|emb\|CAE53864.1\| gluconate-6-phosphate dehydrogenase, Gnd protein [Yersinia enterocolitic...	160.0	[0..5]	[252..2]

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Predicted Domain #1

Region A:
Residues: [1-258]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPRIKKSIG IIGCGRFGAL LSEMLSEEFE VSVYDVKPDP YLTHINFTDL ESVLQLSTIF  60
   61 IAVPIHHFKN TIIKIASKLI KKTTVIDVCS VKCYPVEIMQ AHLPPSVGII ATHPLFGPDS 120
  121 LQKAQLKMMM HPARDTHDCY EFWKNYFSSK KIKILEMTPD QHDRFSARSQ SITHFIGRTL 180
  181 ELMGSQSTEM DTIGYKNLLA VMAQTCNDKW DLFLDLKRFN PYAAQTIGEF IEKSIHLQKE 240
  241 ITKLSPFPDA SREQAKER

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.221849
Match:	2iyoA
Description:	No description for 2iyoA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits