YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29654245, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	222 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29654245, gi|....

Description	E-value	Query Range	Subject Range
gi\|75908643, gi\|... - gi\|75908643\|ref\|YP_322939.1\| O-methyltransferase family protein [Anabaena variabilis ATCC 29413], gi...	165.0	[0..1]	[220..14]
gi\|186683820, gi... - gi\|23129851\|ref\|ZP_00111674.1\| COG4122: Predicted O-methyltransferase [Nostoc punctiforme PCC 73102]...	165.0	[0..1]	[222..1]
gi\|67922609, gi\|... - gi\|67922609\|ref\|ZP_00516115.1\| Caffeoyl-CoA O-methyltransferase [Crocosphaera watsonii WH 8501], gi\|...	164.0	[0..1]	[221..1]
gi\|17134318, gi\|... - gi\|17232671\|ref\|NP_489219.1\| O-methyltransferase [Nostoc sp. PCC 7120], gi\|17134318\|dbj\|BAB76878.1\| ... gi\|25317653 - pir\|\|AC2453 O-methyltransferase [imported] - Nostoc sp. (strain PCC 7120)	162.0	[0..1]	[220..1]
gi\|83814298, gi\|... - gi\|83814298\|ref\|YP_446515.1\| O-methyltransferase family protein [Salinibacter ruber DSM 13855], gi\|8...	159.0	[0..1]	[221..1]
gi\|77164770, gi\|... - gi\|77164770\|ref\|YP_343295.1\| O-methyltransferase family protein [Nitrosococcus oceani ATCC 19707], g... gi\|207089666 - gi\|207089666\|gb\|EDZ66937.1\| O-methyltransferase superfamily [Nitrosococcus oceani AFC27] gi\|224410012, gi... - gi\|254433333\|ref\|ZP_05046841.1\| O-methyltransferase superfamily [Nitrosococcus oceani AFC27], gi\|224...	158.0	[0..1]	[221..1]
gi\|159120680, gi... - gi\|94494238\|ref\|ZP_01301441.1\| hypothetical protein Rgryl_01000771 [Rickettsiella grylli], gi\|160871...	157.0	[0..1]	[221..1]
gi\|83647044, gi\|... - gi\|83647044\|ref\|YP_435479.1\| O-methyltransferase [Hahella chejuensis KCTC 2396], gi\|83635087\|gb\|ABC3...	157.0	[0..1]	[221..1]

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Predicted Domain #1

Region A:
Residues: [1-222]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSINTTLLTP ELYQYLLQVS LREPPLLAEL REETTRSFST YAMQTAPEQA QLLALLVKLM  60
   61 QAKKVIDIGT FTGYSAIAMG LALPKDGTLI TCDVDEKSTA LAKEYWEKAG LSDKIGLRLS 120
  121 PAKDTLAELI HAGQAWQYDL IYIDADKANT DLYYEESLKL LREGGLIAVD NVLRRGQVAD 180
  181 EENQSENNQL IRLFNQKVYK DERVDMILIP IGDGLTLARK KS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	30.0
Match:	2avdA
Description:	Crystal Structure of Human Catechol-O-methyltransferase domain containing 1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.62377578202456	bayes_pls_golite062009
transferase activity	1.20063885869845	bayes_pls_golite062009
transferase activity, transferring one-carbon groups	1.05991383541555	bayes_pls_golite062009
methyltransferase activity	1.04943568976829	bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity	0.414568039011584	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: