YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29654177, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	295 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29654177, gi|....

Description	E-value	Query Range	Subject Range
gi\|42519467, gi\|... - gi\|42519467\|ref\|NP_965397.1\| UTP--glucose-1-phosphate uridylyltransferase [Lactobacillus johnsonii N...	249.0	[0..3]	[293..2]
gi\|23002796 - gi\|23002796\|ref\|ZP_00046469.1\| COG1210: UDP-glucose pyrophosphorylase [Lactobacillus gasseri] gi\|227521298, gi... - gi\|227521298\|ref\|ZP_03951347.1\| UTP--glucose-1-phosphate uridylyltransferase [Lactobacillus gasseri ... gi\|116629360, gi... - gi\|23002796\|ref\|ZP_00046469.1\| hypothetical protein Lgas_03000721 [Lactobacillus gasseri ATCC 33323]...	247.0	[0..3]	[292..2]
gi\|170715822, gi... - gi\|170715822\|gb\|EDT28004.1\| UTP-glucose-1-phosphate uridylyltransferase [Clostridium perfringens CPE... gi\|170712761, gi... - gi\|170712761\|gb\|EDT24943.1\| UTP-glucose-1-phosphate uridylyltransferase [Clostridium perfringens B s... gi\|18144169, gi\|... - gi\|18309492\|ref\|NP_561426.1\| UTP-glucose-1-phosphate uridylyltransferase [Clostridium perfringens st... gi\|110674009, gi... - gi\|110799362\|ref\|YP_694942.1\| UTP-glucose-1-phosphate uridylyltransferase [Clostridium perfringens A...	247.0	[0..2]	[287..3]
gi\|227903507, gi... - gi\|227903507\|ref\|ZP_04021312.1\| UTP-glucose-1-phosphate uridylyltransferase [Lactobacillus acidophil... gi\|58254267, gi\|... - gi\|58336950\|ref\|YP_193535.1\| UTP-glucose-1-phosphate uridylyltransferase [Lactobacillus acidophilus ...	245.0	[0..3]	[290..2]
gi\|110684193, gi... - gi\|110803692\|ref\|YP_697798.1\| UTP-glucose-1-phosphate uridylyltransferase [Clostridium perfringens S...	245.0	[0..2]	[287..3]
gi\|229130524, gi... - gi\|229130524\|ref\|ZP_04259480.1\| UTP--glucose-1-phosphate uridylyltransferase [Bacillus cereus BDRD-C... gi\|30023307, gi\|... - gi\|30023307\|ref\|NP_834938.1\| UTP--glucose-1-phosphate uridylyltransferase [Bacillus cereus ATCC 1457...	243.0	[0..1]	[293..1]
gi\|110674379, gi... - gi\|110799732\|ref\|YP_694938.1\| UTP-glucose-1-phosphate uridylyltransferase [Clostridium perfringens A...	242.0	[0..2]	[293..3]
gi\|42784441, gi\|... - gi\|42784441\|ref\|NP_981688.1\| UTP-glucose-1-phosphate uridylyltransferase [Bacillus cereus ATCC 10987...	241.0	[0..1]	[292..1]

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Predicted Domain #1

Region A:
Residues: [1-295]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKVTTAVFP VAGLGTRFLP VTKAGPKEML PIVDKPIIQY VVEEAIAAGI THLVFVTSSS  60
   61 KRAIEDYFDS NYELETRLRS SRKLDALKLI QNLLPKEVRI SYVRQAHPLG LGDAVLSAKH 120
  121 VVGDQPFAVL LPDDIIDCGE KSCLQLMMEA FEKHQRNIIA VEQVPLNQTD KYGIVSVVDE 180
  181 HQVKRITGMV EKPPLGSALS DWAVTGRYIL SPRVFDHLDA ISCGVGGEIQ LTDAIVALLQ 240
  241 EEQVLAFPFK GHRYDCGSRL GFLQATIAYA LKRPEFKEPL REYLFKLLGS ECVGG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	54.09691
Match:	2ux8A
Description:	No description for 2ux8A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits