YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29654011, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	181 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29654011, gi|....

Description	E-value	Query Range	Subject Range
gi\|153207352, gi... - gi\|153207352\|ref\|ZP_01946089.1\| histidinol-phosphate phosphatase family protein [Coxiella burnetii '... gi\|95927925, gi\|... - gi\|95927925\|ref\|ZP_01310677.1\| hypothetical protein CburR_01000303 [Coxiella burnetii RSA 331], gi\|1... gi\|165918455, gi... - gi\|165918455\|ref\|ZP_02218541.1\| histidinol-phosphate phosphatase family protein [Coxiella burnetii R... gi\|94492416, gi\|... - gi\|94492416\|ref\|ZP_01299624.1\| hypothetical protein CburD_01000748 [Coxiella burnetii Dugway 7E9-12]... gi\|212013358, gi... - gi\|212219096\|ref\|YP_002305883.1\| histidinol-phosphatase [Coxiella burnetii CbuK_Q154], gi\|212013358\|...	134.0	[0..1]	[181..1]
GMHBB_PASMU - D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase OS=Pasteurella multocida (strain Pm70)... GMHB_PASMU - D,D-heptose 1,7-bisphosphate phosphatase OS=Pasteurella multocida GN=gmhB PE=3 SV=1	129.0	[0..5]	[180..1]
GMHB_HAEDU - D,D-heptose 1,7-bisphosphate phosphatase OS=Haemophilus ducreyi GN=gmhB PE=3 SV=1 GMHBB_HAEDU - D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase OS=Haemophilus ducreyi (strain 35000HP...	127.0	[0..4]	[175..1]
gi\|52306542, gi\|... - gi\|52424490\|ref\|YP_087627.1\| D,D-heptose 1,7-bisphosphate phosphatase [Mannheimia succiniciproducens...	123.0	[0..3]	[179..5]
gi\|75428804, gi\|... - gi\|75428804\|ref\|ZP_00731919.1\| histidinol phosphatase and related phosphatases [Actinobacillus succi...	123.0	[0..5]	[179..1]
gi\|24374380, gi\|... - gi\|24374380\|ref\|NP_718423.1\| D,D-heptose 1,7-bisphosphate phosphatase [Shewanella oneidensis MR-1], ... SO2851 - histidinol phosphatase domain protein	123.0	[0..2]	[181..1]
gi\|67930416, gi\|... - gi\|67930416\|ref\|ZP_00523589.1\| Histidinol-phosphate phosphatase:HAD-superfamily hydrolase, subfamily...	123.0	[0..7]	[176..8]
gi\|32030676 - gi\|32030676\|ref\|ZP_00133476.1\| COG0241: Histidinol phosphatase and related phosphatases [Haemophilus...	122.0	[0..3]	[179..1]
GMHB_HAEIN - D,D-heptose 1,7-bisphosphate phosphatase OS=Haemophilus influenzae GN=gmhB PE=3 SV=1 GMHBB_HAEIN - D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase OS=Haemophilus influenzae (strain ATCC...	121.0	[0..5]	[179..1]

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Predicted Domain #1

Region A:
Residues: [1-181]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVITSKPCVF LDRDGVIVVP EFRNGRTFAP KTLEGFSYFP DTKKTLVRLK TAGYLLIVVT  60
   61 NQPDVGNGIT SLATIENMHN KMRQELPIDH IEVCYHSQKD NCHCRKPKAG MLLNSLKKFN 120
  121 IIVQKSFMIG DRSSDIEAGR KLNLKTIFID HHYQEPITAN PDYICQDLSQ GVEIILREEN 180
  181 A

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	27.154902
Match:	2gmwA
Description:	No description for 2gmwA was found.

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.92340854382984	bayes_pls_golite062009
imidazoleglycerol-phosphate dehydratase activity	0.35884565083558	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: