YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29653786, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	171 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29653786, gi|....

Description	E-value	Query Range	Subject Range
OGT_METAC - Methylated-DNA--protein-cysteine methyltransferase OS=Methanosarcina acetivorans GN=ogt PE=3 SV=1 OGT_METAC - Methylated-DNA--protein-cysteine methyltransferase OS=Methanosarcina acetivorans (strain ATCC 35395 ...	191.0	[0..6]	[156..1]
gi\|154355277, gi... - gi\|94491068\|ref\|ZP_01298287.1\| hypothetical protein CburD_01001798 [Coxiella burnetii Dugway 7E9-12]...	190.0	[0..1]	[171..1]
gi\|167036637, gi... - gi\|76796157\|ref\|ZP_00778524.1\| Methylated-DNA-(protein)-cysteine S-methyltransferase [Thermoanaeroba... gi\|114845299, gi... - gi\|167039287\|ref\|YP_001662272.1\| methylated-DNA--protein-cysteine methyltransferase [Thermoanaerobac... gi\|242232317, gi... - gi\|242256119\|ref\|ZP_04801015.1\| methylated-DNA/protein-cysteine methyltransferase [Thermoanaerobacte... gi\|241903601, gi... - gi\|241903601\|ref\|ZP_04788322.1\| methylated-DNA/protein-cysteine methyltransferase [Thermoanaerobacte...	186.0	[0..6]	[159..1]
OGT_METBF - Methylated-DNA--protein-cysteine methyltransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 80...	186.0	[0..6]	[155..1]
gi\|20808873, gi\|... - gi\|20808873\|ref\|NP_624044.1\| methylated DNA-protein cysteine methyltransferase [Thermoanaerobacter t... gi\|20808873 - gi\|20808873\|ref\|NP_624044.1\| Methylated DNA-protein cysteine methyltransferase [Thermoanaerobacter t...	184.0	[0..6]	[159..23]
gi\|88780111, gi\|... - gi\|88797242\|ref\|ZP_01112832.1\| methylated-DNA-protein-cysteine S-methyltransferase [Reinekea sp. MED...	183.0	[0..5]	[156..1]
gi\|170706110, gi... - gi\|170706110\|ref\|ZP_02896572.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthr... gi\|170686383, gi... - gi\|170686383\|ref\|ZP_02877604.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthr... gi\|167638421, gi... - gi\|167638421\|ref\|ZP_02396698.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthr... gi\|167632760, gi... - gi\|167632760\|ref\|ZP_02391086.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthr... gi\|165870103, gi... - gi\|165870103\|ref\|ZP_02214759.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthr... gi\|228945677, gi... - gi\|228945677\|ref\|ZP_04108024.1\| Ogt [Bacillus thuringiensis serovar monterrey BGSC 4AJ1], gi\|2288138... gi\|49184904, gi\|... - gi\|49184904\|ref\|YP_028156.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthraci... gi\|228826319, gi... - gi\|228933363\|ref\|ZP_04096218.1\| Ogt [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1], gi\|22... gi\|47502477, gi\|... - gi\|47527329\|ref\|YP_018678.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthraci... gi\|228914648, gi... - gi\|228914648\|ref\|ZP_04078257.1\| Ogt [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1], gi\|228844... gi\|30262064, gi\|... - gi\|30262064\|ref\|NP_844441.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthraci... gi\|227002491, gi... - gi\|227815140\|ref\|YP_002815149.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anth... gi\|254721025 - gi\|254721025\|ref\|ZP_05182816.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthr... gi\|254684630 - gi\|254684630\|ref\|ZP_05148490.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthr... gi\|229603349, gi... - gi\|229603349\|ref\|YP_002866427.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anth... gi\|229196290, gi... - gi\|229196290\|ref\|ZP_04323038.1\| Ogt [Bacillus cereus m1293], gi\|228587144\|gb\|EEK45214.1\| Ogt [Bacill... gi\|218540201, gi... - gi\|218903187\|ref\|YP_002451021.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus cere... gi\|254758262 - gi\|254758262\|ref\|ZP_05210289.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthr... gi\|195990748, gi... - gi\|196036679\|ref\|ZP_03104072.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus cereu... gi\|254751390 - gi\|254751390\|ref\|ZP_05203427.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthr... gi\|190560970, gi... - gi\|190567915\|ref\|ZP_03020826.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthr... gi\|254739450 - gi\|254739450\|ref\|ZP_05197149.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthr... gi\|177650894, gi... - gi\|177650894\|ref\|ZP_02933791.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthr... gi\|254737074 - gi\|254737074\|ref\|ZP_05194778.1\| methylated-DNA--protein-cysteine S-methyltransferase [Bacillus anthr...	183.0	[0..6]	[157..1]
OGT_METMA - Methylated-DNA--protein-cysteine methyltransferase OS=Methanosarcina mazei GN=ogt PE=3 SV=1 OGT_METMA - Methylated-DNA--protein-cysteine methyltransferase OS=Methanosarcina mazei (strain ATCC BAA-159 / DS...	182.0	[0..6]	[155..1]
gi\|2935421 - gi\|2935421\|gb\|AAC25987.1\| adaptive response regulatory protein [Pseudoalteromonas sp. S9]	182.0	[0..5]	[161..184]
gi\|163939865, gi... - gi\|89208799\|ref\|ZP_01187285.1\| Methylated-DNA-(protein)-cysteine S-methyltransferase [Bacillus weihe...	182.0	[0..6]	[157..1]

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Predicted Domain #1

Region A:
Residues: [1-171]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDAVCYQAT VSTPVGKIGV RTSDDHLLGI DYLYDDSILV KPKTILAKET VEQLLCYFAD  60
   61 PEFPFEIPIA LGLTPFQETV LNALRTIPVG TTRTYAQLAE QLDTRARPIG NACRKNPIPI 120
  121 IIPCHRVVAA THLGGYSSAT KGKLLAVKQW LLQHESASFE SNLGEKLKKT K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	39.39794
Match:	1sfeA
Description:	ADA O6-METHYLGUANINE-DNA METHYLTRANSFERASE FROM ESCHERICHIA COLI
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
methylated-DNA-[protein]-cysteine S-methyltransferase activity	3.9938943760254	bayes_pls_golite062009
S-methyltransferase activity	2.96219931728042	bayes_pls_golite062009
catalytic activity	2.27882522649583	bayes_pls_golite062009
methyltransferase activity	1.63681159093596	bayes_pls_golite062009
transferase activity, transferring one-carbon groups	1.6341981985862	bayes_pls_golite062009
transferase activity	1.42883081715544	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: