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View Structure Prediction Details

Protein: PANC_COXBU
Organism: Coxiella burnetii RSA 493
Length: 257 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PANC_COXBU.

Description E-value Query
Range		 Subject
Range
PANC_THEMA - Pantothenate synthetase OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=...
PANC_THEMA - Pantothenate synthetase OS=Thermotoga maritima GN=panC PE=1 SV=1
 392.0 [0..3] [252..2]
PANC_THENE - Pantothenate synthetase OS=Thermotoga neapolitana GN=panC PE=3 SV=1
 387.0 [0..3] [252..2]
gi|196253301, gi... - gi|196253301|ref|ZP_03151934.1| pantoate--beta-alanine ligase [Clostridium thermocellum DSM 4150], g...
PANC_CLOTH - Pantothenate synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NC...
 381.0 [0..3] [253..2]
PANC_MOOTA - Pantothenate synthetase OS=Moorella thermoacetica (strain ATCC 39073) GN=panC PE=3 SV=1
 377.0 [0..3] [253..2]
PANC_PSEPK - Pantothenate synthetase OS=Pseudomonas putida (strain KT2440) GN=panC PE=3 SV=1
 377.0 [0..5] [256..4]
PANC_AQUAE - Pantothenate synthetase OS=Aquifex aeolicus (strain VF5) GN=panC PE=3 SV=1
PANC_AQUAE - Pantothenate synthetase OS=Aquifex aeolicus GN=panC PE=3 SV=1
 375.0 [0..1] [251..1]
PANC_PSE14 - Pantothenate synthetase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) GN=panC P...
 375.0 [0..5] [251..4]
PANC_PSEP1 - Pantothenate synthetase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=panC PE=3 SV=1
 374.0 [0..5] [256..4]
PANC_PSEU2 - Pantothenate synthetase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=panC PE=3 SV=1
 372.0 [0..5] [251..4]
PANC_PSEE4 - Pantothenate synthetase OS=Pseudomonas entomophila (strain L48) GN=panC PE=3 SV=1
gi|95112667 - gi|95112667|emb|CAK17395.1| pantoate--beta-alanine ligase [Pseudomonas entomophila L48]
 372.0 [0..5] [256..4]

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Predicted Domain #1
Region A:
Residues: [1-257] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKVIEALSD WQSIRKTIND LSVGFVPTMG NLHAGHLSLL ERSKCENTIT VLSLFINPTQ  60
   61 FNDKNDFKNY PRTLAQDIAM AEENGIDYVL APTDDALYPD QYAYKITNST INNQEAEFRP 120
  121 RHFDGVLTVV MKLLLLVKPT RAYFGEKDYQ QLQLVKGLAE AFFLDTEIIG CKIVRNEFGL 180
  181 PLSSRNRRLT EDQYQLAQRF SEIFHSDLSC DEIKNALIQE GIIVDYIEDY NERRFAAVHV 240
  241 GDIRLIDNIP FAKDKKC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 100.0
Match: 1ihoA
Description: Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
pantoate-beta-alanine ligase activity 2.65346774278189 bayes_pls_golite062009
catalytic activity 2.37674226834122 bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds 2.3170925937521 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 2.3170925937521 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 2.30614862840764 bayes_pls_golite062009
ligase activity 1.60661539954645 bayes_pls_golite062009
pantetheine-phosphate adenylyltransferase activity 1.25694296916214 bayes_pls_golite062009
adenylyltransferase activity 1.08055019963499 bayes_pls_golite062009
nicotinate-nucleotide adenylyltransferase activity 0.577737023273364 bayes_pls_golite062009
nicotinamide-nucleotide adenylyltransferase activity 0.324080100642614 bayes_pls_golite062009
nucleotidyltransferase activity 0.0927746101202402 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle