YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29653673, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	83 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29653673, gi|....

Description	E-value	Query Range	Subject Range
gi\|9715733 - gi\|9715733\|emb\|CAC01603.1\| peptide synthetase [Anabaena circinalis 90]	90.0	[0..2]	[74..2165]
gi\|75907835, gi\|... - gi\|75907835\|ref\|YP_322131.1\| non-ribosomal peptide synthase [Anabaena variabilis ATCC 29413], gi\|757...	90.0	[0..2]	[81..1067]
gi\|23125759 - gi\|23125759\|ref\|ZP_00107678.1\| COG1020: Non-ribosomal peptide synthetase modules and related protein...	90.0	[0..2]	[80..3733]
gi\|89203970, gi\|... - gi\|89203970\|ref\|ZP_01182549.1\| Non-ribosomal peptide synthase:Amino acid adenylation [Bacillus weihe...	89.0	[0..2]	[77..2045]
gi\|115379471, gi... - gi\|115379471\|ref\|ZP_01466568.1\| linear gramicidin synthetase subunit B [Stigmatella aurantiaca DW4/3...	89.0	[0..2]	[77..275]
TYCC_BREPA - Tyrocidine synthase 3 OS=Brevibacillus parabrevis GN=tycC PE=1 SV=1 gi\|2623773, gi\|7... - gi\|7522159\|pir\|\|T31076 tyrocidine synthetase 3 - Brevibacillus brevis, gi\|2623773\|gb\|AAC45930.1\| tyr...	88.0	[0..3]	[76..968]
gi\|65336268 - gi\|65336268\|gb\|AAY42397.1\| HctE [Lyngbya majuscula]	88.0	[0..2]	[75..3263]

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Predicted Domain #1

Region A:
Residues: [1-83]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNQINHRIK TIIAAQSQIP IENIHDNSKF HANLGFDSLD VVNLISAINM EFSLNLMEND  60
   61 IIHLETVAEL VDCVEQKIEN KSA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	16.69897
Match:	2ehsA
Description:	No description for 2ehsA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits