YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29540784, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	92 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29540784, gi|....

Description	E-value	Query Range	Subject Range
gi\|29827480, gi\|... - gi\|29827480\|ref\|NP_822114.1\| type I polyketide synthase AVES 2 [Streptomyces avermitilis MA-4680], g... gi\|5902892 - gi\|5902892\|dbj\|BAA84475.1\| type I polyketide synthase AVES 2 [Streptomyces avermitilis]	105.0	[0..2]	[89..6035]
gi\|12055082, gi\|... - gi\|4678703\|emb\|CAB41041.1\| polyketide synthase [Streptomyces natalensis], gi\|12055082\|emb\|CAC20931.1...	103.0	[0..5]	[89..4899]
gi\|41396248, gi\|... - gi\|41407894\|ref\|NP_960730.1\| Pks12 [Mycobacterium avium subsp. paratuberculosis K-10], gi\|41396248\|g...	103.0	[0..3]	[90..1968]
gi\|62737769 - gi\|62737769\|gb\|AAX98185.1\| polyketide synthase type I [Streptomyces aizunensis]	103.0	[0..5]	[90..1691]
gi\|82658726 - gi\|82658726\|gb\|ABB88533.1\| polyketide synthase type I [Streptomyces sp. Eco86]	102.0	[0..3]	[89..4139]
gi\|74026479 - gi\|74026479\|gb\|AAZ94388.1\| nodular polyketide synthase [Streptomyces neyagawaensis]	102.0	[0..4]	[89..3026]
gi\|15841536, gi\|... - gi\|15841536\|ref\|NP_336573.1\| polyketide synthase [Mycobacterium tuberculosis CDC1551], gi\|13881781\|g...	102.0	[0..3]	[92..1957]
gi\|8050850 - gi\|8050850\|gb\|AAF71776.1\| NysC [Streptomyces noursei] gi\|8050850 - gi\|8050850\|gb\|AAF71776.1\|AF263912_15 NysC [Streptomyces noursei]	102.0	[0..4]	[90..1655]
gi\|7460250 - pir\|\|G70944 probable polyketide synthase Rv2048c - Mycobacterium tuberculosis (strain H37RV) gi\|2896785, gi\|1... - gi\|2896785\|emb\|CAA17262.1\| Probable polyketide synthase pks12 [Mycobacterium tuberculosis H37Rv], gi...	102.0	[0..3]	[92..1957]
gi\|124601277, gi... - gi\|81253993\|ref\|ZP_00878521.1\| COG3321: Polyketide synthase modules and related proteins [Mycobacter...	102.0	[0..3]	[92..1957]

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Predicted Domain #1

Region A:
Residues: [1-92]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKVVNTKKR AWVALTDTIQ KILPDITQEQ LQPQNSLRTL GANSMDRAEI IISVMETLDL  60
   61 KLPLSYFSEE KNLGELADLL DTQLHIMERN KK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.0
Match:	2ju1A
Description:	No description for 2ju1A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits