YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29540719, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	254 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29540719, gi|....

Description	E-value	Query Range	Subject Range
gi\|85694935, gi\|... - gi\|85711022\|ref\|ZP_01042082.1\| Phosphatidylserine synthase [Idiomarina baltica OS145], gi\|85694935\|g...	188.0	[0..1]	[240..8]
gi\|78360297, gi\|... - gi\|78367652\|ref\|ZP_00837917.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Shewanella sp. ...	186.0	[0..4]	[254..6]
gi\|88698686, gi\|... - gi\|88707036\|ref\|ZP_01104732.1\| CDP-alcohol phosphatidyltransferase family protein [gamma proteobacte...	184.0	[0..4]	[238..75]
gi\|67159494, gi\|... - gi\|67159494\|ref\|ZP_00420012.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Azotobacter vin... gi\|67159494, gi\|... - gi\|67159494\|ref\|ZP_00420012.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Azotobacter vin...	184.0	[0..2]	[240..30]
gi\|159121111, gi... - gi\|94494129\|ref\|ZP_01301332.1\| hypothetical protein Rgryl_01000661 [Rickettsiella grylli], gi\|160872...	184.0	[0..8]	[247..41]
gi\|90022183, gi\|... - gi\|90022183\|ref\|YP_528010.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Saccharophagus de...	183.0	[0..4]	[243..33]
gi\|109897665, gi... - gi\|76795147\|ref\|ZP_00777582.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Pseudoalteromon...	181.0	[0..8]	[251..5]
gi\|68555597, gi\|... - gi\|94309861\|ref\|YP_583071.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Ralstonia metalli...	181.0	[0..3]	[241..41]
gi\|68548599, gi\|... - gi\|68548599\|ref\|ZP_00588081.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase [Shewanella amaz...	180.0	[0..4]	[240..6]
gi\|24375077, gi\|... - gi\|24375077\|ref\|NP_719120.1\| CDP-diacylglycerol--serine O-phosphatidyltransferase, putative [Shewane... SO3575 - CDP-diacylglycerol--serine O-phosphatidyltransferase putative	179.0	[0..2]	[254..4]

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Predicted Domain #1

Region A:
Residues: [1-254]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTETKHPRVR GIYLLPNLFT VGAMFAGFYA IVAGMKGHYE SAAIAIFIAM VMDTLDGRIA  60
   61 RLLHAQSEFG VQLDSLSDML SFGIAPALVM YSWSLAVLGK PGWIAAFIYA ACTALRLARF 120
  121 NVQVKKVDKR YFQGLPTPSA AGLVASIIWV CNVFDVAGES IALPLSVVAI LLGLLKVSTI 180
  181 RYRSFKDFQL QNRVPFVVIL GVVLIIALIA FDPPDILLVI FFLYVISGPI GTLWSLHKRR 240
  241 RQKKKLRRQK NQKN

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	19.823909
Match:	PF01066.12
Description:	No description for PF01066.12 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits