YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29653397, gi\|...
Organism:	Coxiella burnetii RSA 493
Length:	86 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29653397, gi|....

Description	E-value	Query Range	Subject Range
gi\|23125759 - gi\|23125759\|ref\|ZP_00107678.1\| COG1020: Non-ribosomal peptide synthetase modules and related protein...	91.0	[0..2]	[86..3732]
gi\|9715734 - gi\|9715734\|emb\|CAC01604.1\| peptide synthetase [Anabaena circinalis 90]	90.0	[0..1]	[85..3498]
gi\|115379471, gi... - gi\|115379471\|ref\|ZP_01466568.1\| linear gramicidin synthetase subunit B [Stigmatella aurantiaca DW4/3...	89.0	[0..2]	[80..274]
gi\|163943331, gi... - gi\|89203969\|ref\|ZP_01182548.1\| Amino acid adenylation [Bacillus weihenstephanensis KBAB4], gi\|891581...	88.0	[0..1]	[80..969]
gi\|75907835, gi\|... - gi\|75907835\|ref\|YP_322131.1\| non-ribosomal peptide synthase [Anabaena variabilis ATCC 29413], gi\|757...	88.0	[0..2]	[81..1066]
gi\|67857340, gi\|... - gi\|67921223\|ref\|ZP_00514742.1\| Beta-ketoacyl synthase:Acyl transferase region:Phosphopantetheine-bin...	88.0	[0..2]	[83..1440]
gi\|29896138, gi\|... - gi\|30020587\|ref\|NP_832218.1\| peptide synthetase [Bacillus cereus ATCC 14579], gi\|29896138\|gb\|AAP0941...	87.0	[0..2]	[84..508]
GRSB_ANEMI - Gramicidin S synthase 2 OS=Aneurinibacillus migulanus GN=grsB PE=3 SV=2	87.0	[0..2]	[86..972]

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Predicted Domain #1

Region A:
Residues: [1-86]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKVEIFNKI KTIITPFSKA PDAVAQATYA SRFLEDLQIN SARLIDIVLA FEDTFNIEIS  60
   61 DDQADSILTI EDAVNLISSQ VKTVAV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	16.0
Match:	2ehsA
Description:	No description for 2ehsA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits