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View Structure Prediction Details

Protein: gi|29344968, gi|...
Organism: Enterococcus faecalis V583
Length: 257 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29344968, gi|....

Description E-value Query
Range
Subject
Range
gi|37524835, gi|... - gi|37524835|ref|NP_928179.1| PTS system, N-acetylgalactosamine-specific IIC component 1 (EIIC-AGA) (...
252.0 [0..1] [257..1]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVQAILVGI WAGIAGVDKL VLQTHIHRPI VTGLIVGLIL GDVNTGLITG ATLELVWIGA  60
   61 VAIGGAQPPN VVIGGVIGTA LAIITKSDPQ VTVGLAVPFA VAAQALITLL YTAMSPIMHK 120
  121 FDVYAKKADT RGIERMSSFL PIVLFICYFF VVFLCIFF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [159-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GADKASSFIS ILPEWSIHGL SVAGGMMPAV GFAMLLKTMW ETSYVPFFIF GFVMAAYLGL  60
   61 DTLAVAGLAV AIALYEFYAQ RNNTVTASNN NGGFEEDGI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle