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View Structure Prediction Details

Protein: gi|29344821, gi|...
Organism: Enterococcus faecalis V583
Length: 296 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29344821, gi|....

Description E-value Query
Range
Subject
Range
gi|56419562, gi|... - gi|56419562|ref|YP_146880.1| 3-hydroxyisobutyrate dehydrogenase [Geobacillus kaustophilus HTA426], g...
224.0 [0..1] [285..1]

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Predicted Domain #1
Region A:
Residues: [1-296]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKIGFIGTG VMGKSIIRNM MKNNLSVNVY NRTKSKTDDL VAEGAVWYDT PKAIAEASDI  60
   61 IFTMVGFPSD VEGVYFNETG IFQADLTGKI VVDLTTSTPT LAEKIAKKAA EVGAHALDAP 120
  121 VSGGDLGAKN GTLTIMVGGD QESYDTVLPI FKTFGKTFML HGSAGKGQHT KMANQLMIAG 180
  181 TMTGLTEMLV YANATGLTLE KVLETVGGGS AANWSLSNYG PRILKEDYTP GFFVKHFIKD 240
  241 LKIALDEAKK LDLPLPATQK ATELYESLAD KGFENDGTQA LIKLWWTDGK QPTNKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.0
Match: 1yb4A
Description: Crystal Structure of the Tartronic Semialdehyde Reductase from Salmonella typhimurium LT2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle