YRC Public Data Repository - Protein Structure Prediction

Protein:	HGNC:3358\|MIM:60...
Organism:	SPECIES UNKNOWN
Length:	875 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HGNC:3358|MIM:60....

Description	E-value	Query Range	Subject Range
ENPP3 - ectonucleotide pyrophosphatase/phosphodiesterase 3	0.0	[1..875]	[1..875]
gi\|114609324, gi... - gi\|114609326\|ref\|XP_001168720.1\| PREDICTED: ectonucleotide pyrophosphatase/phosphodiesterase 3 isofo...	0.0	[1..875]	[1..875]
gi\|109072704, gi... - gi\|109072704\|ref\|XP_001103528.1\| PREDICTED: ectonucleotide pyrophosphatase/phosphodiesterase 3 isofo...	0.0	[1..875]	[1..874]
ENPP3_PONAB - Ectonucleotide pyrophosphatase/phosphodiesterase family member 3 OS=Pongo abelii GN=ENPP3 PE=2 SV=1 ENPP3_PONPY - Ectonucleotide pyrophosphatase/phosphodiesterase family member 3 - Pongo pygmaeus (Orangutan)	0.0	[1..875]	[1..873]
ENPP3_RAT - Ectonucleotide pyrophosphatase/phosphodiesterase family member 3 OS=Rattus norvegicus GN=Enpp3 PE=1 ...	0.0	[1..875]	[1..875]
ENPP3_MOUSE - Ectonucleotide pyrophosphatase/phosphodiesterase family member 3 OS=Mus musculus GN=Enpp3 PE=1 SV=1	0.0	[1..875]	[1..874]

Back

Predicted Domain #1

Region A:
Residues: [1-148]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESTLTLATE QPVKKNTLKK YKIACIVLLA LLVIMSLGLG LGLGLRKLEK QGSCRKKCFD  60
   61 ASFRGLENCR CDVACKDRGD CCWDFEDTCV ESTRIWMCNK FRCGETRLEA SLCSCSDDCL 120
  121 QRKDCCADYK SVCQGETSWL EENCDTAQ

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	0.977
Match:	2dduA
Description:	No description for 2dduA was found.

Predicted Domain #2

Region A:
Residues: [149-579]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSQCPEGFDL PPVILFSMDG FRAEYLYTWD TLMPNINKLK TCGIHSKYMR AMYPTKTFPN  60
   61 HYTIVTGLYP ESHGIIDNNM YDVNLNKNFS LSSKEQNNPA WWHGQPMWLT AMYQGLKAAT 120
  121 YFWPGSEVAI NGSFPSIYMP YNGSVPFEER ISTLLKWLDL PKAERPRFYT MYFEEPDSSG 180
  181 HAGGPVSARV IKALQVVDHA FGMLMEGLKQ RNLHNCVNII LLADHGMDQT YCNKMEYMTD 240
  241 YFPRINFFYM YEGPAPRIRA HNIPHDFFSF NSEEIVRNLS CRKPDQHFKP YLTPDLPKRL 300
  301 HYAKNVRIDK VHLFVDQQWL AVRSKSNTNC GGGNHGYNNE FRSMEAIFLA HGPSFKEKTE 360
  361 VEPFENIEVY NLMCDLLRIQ PAPNNGTHGS LNHLLKVPFY EPSHAEEVSK FSVCGFANPL 420
  421 PTESLDCFCP H

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	64.0
Match:	2gsnA
Description:	No description for 2gsnA was found.

Predicted Domain #3

Region A:
Residues: [580-875]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQNSTQLEQV NQMLNLTQEE ITATVKVNLP FGRPRVLQKN VDHCLLYHRE YVSGFGKAMR  60
   61 MPMWSSYTVP QLGDTSPLPP TVPDCLRADV RVPPSESQKC SFYLADKNIT HGFLYPPASN 120
  121 RTSDSQYDAL ITSNLVPMYE EFRKMWDYFH SVLLIKHATE RNGVNVVSGP IFDYNYDGHF 180
  181 DAPDEITKHL ANTDVPIPTH YFVVLTSCKN KSHTPENCPG WLDVLPFIIP HRPTNVESCP 240
  241 EGKPEALWVE ERFTAHIARV RDVELLTGLD FYQDKVQPVS EILQLKTYLP TFETTI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	58.69897
Match:	1zm8A
Description:	Apo Crystal structure of Nuclease A from Anabaena sp.
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits