YRC Public Data Repository - Protein Structure Prediction

Protein:	HGNC:2846\|MIM:60...
Organism:	SPECIES UNKNOWN
Length:	220 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HGNC:2846|MIM:60....

Description	E-value	Query Range	Subject Range
gi\|114685051, gi... - gi\|114685051\|ref\|XP_514972.2\| PREDICTED: DiGeorge syndrome critical region protein 6 isoform 2 [Pan ...	1.0E-92	[1..220]	[1..220]
gi\|54695688 - gi\|54695688\|gb\|AAV38216.1\| DiGeorge syndrome critical region gene 6 [synthetic construct]	2.0E-91	[1..220]	[1..220]
gi\|109451282, gi... - gi\|109451860\|emb\|CAK54801.1\| DGCR6L [synthetic construct], gi\|109451282\|emb\|CAK54502.1\| DGCR6L [synt... HGNC:18551\|MIM:6... - syndrome critical region gene 6-like DGCR6L - DiGeorge syndrome critical region gene 6-like	6.0E-91	[1..220]	[1..220]
gi\|109093329 - gi\|109093329\|ref\|XP_001082214.1\| PREDICTED: similar to DiGeorge syndrome critical region protein 6 [...	3.0E-89	[1..220]	[1..220]
gi\|37681781, gi\|... - gi\|51859018\|gb\|AAH81411.1\| Zgc:101841 protein [Danio rerio], gi\|45387889\|ref\|NP_991302.1\| DiGeorge s...	7.0E-75	[1..194]	[1..194]
DGCR6_MOUSE - Protein DGCR6 OS=Mus musculus GN=Dgcr6 PE=2 SV=2	2.0E-74	[1..198]	[1..198]
gi\|109494721, gi... - gi\|62658204\|ref\|XP_221270.2\| PREDICTED: similar to DGCR6 protein (DiGeorge syndrome critical region ...	2.0E-74	[1..198]	[1..198]
gi\|73995887 - gi\|73995887\|ref\|XP_849993.1\| PREDICTED: similar to DiGeorge syndrome critical region protein 6 [Cani...	1.0E-72	[1..198]	[1..198]

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Predicted Domain #1

Region A:
Residues: [1-220]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERYAGALEE VADGARQQER HYQLLSALQS LVKELPSSFQ QRLSYTTLSD LALALLDGTV  60
   61 FEIVQGLLEI QHLTEKSLYN QRLRLQNEHR VLRQALRQKH QEAQQACRPH NLPVLQAAQQ 120
  121 RELEAVEHRI REEQRAMDQK IVLELDRKVA DQQSTLEKAG VAGFYVTTNP QELMLQMNLL 180
  181 ELIRKLQQRG CWAGKAALGL GGPWQLPAAQ CDQKGSPVPP

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	136.05061
Match:	PF07324.2
Description:	No description for PF07324.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits