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View Structure Prediction Details

Protein: HGNC:19358|MIM:6...
Organism: SPECIES UNKNOWN
Length: 488 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HGNC:19358|MIM:6....

Description E-value Query
Range
Subject
Range
ALG12_MOUSE - Dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase OS=Mus musculus GN=Alg12 PE=2 SV=2
0.0 [1..488] [1..486]
gi|22266724 - gi|22266724|gb|AAM94900.1|AF311904_1 membrane protein SB87 precursor [Homo sapiens]
0.0 [1..471] [1..471]
gi|114687013, gi... - gi|114687015|ref|XP_001140006.1| PREDICTED: asparagine-linked glycosylation 12 isoform 3 [Pan troglo...
0.0 [1..486] [1..486]
gi|220948018 - gi|220948018|gb|ACL86552.1| CG8412-PA [synthetic construct]
CG8412-PA - This gene is referred to in FlyBase by the symbol Dmel\CG8412 (CG8412, FBgn0037743). It is a protein...
0.0 [15..485] [3..479]
gi|109481118, gi... - gi|215276943|ref|NP_001101574.2| alpha-1,6-mannosyltransferase ALG12 [Rattus norvegicus], gi|1718467...
0.0 [1..488] [1..488]
gi|54638331, gi|... - gi|54638331|gb|EAL27733.1| GA21058-PA [Drosophila pseudoobscura], gi|125774667|ref|XP_001358592.1| G...
0.0 [16..484] [4..478]
gi|73968859 - gi|73968859|ref|XP_848418.1| PREDICTED: similar to alpha-1,6-mannosyltransferase ALG12 isoform 2 [Ca...
0.0 [13..488] [15..491]

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Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKGSSGRR PLLLGLLVAV ATVHLVICPY TKVEESFNLQ ATHDLLYHWQ DLEQYDHLEF  60
   61 PGVVPRTFLG PVVIAVFSSP AVYVLSLLEM SKFYSQLIVR GVLGLGVIFG LWTLQKEVRR 120
  121 HFGAMVATMF CWVTAMQFHL MFYCTRTLPN VLALPVVLLA LAAWLRHEWA RFIWLSAFAI 180
  181 IVFRVELCLF LGLLLLLALG NRKVSVVRAL RHAVPAGILC LGLTVAVDSY FWRQLTWP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [239-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGKVLWYNTV LNKSSNWGTS PLLWYFYSAL PRGLGCSLLF IPLGLVDRRT HAPTVLALGF  60
   61 MALYSLLPHK ELRFIIYAFP MLNITAARGC SYLLNNYKKS WLYKAGSLLV IGHLVVNAAY 120
  121 SATALYVSHF N

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [370-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YPGGVAMQRL HQLVPPQTDV LLHIDVAAAQ TGVSRFLQVN SAWRYDKRED VQPGTGMLAY  60
   61 THILMEAAPG LLALYRDTHR VLASVVGTTG VSLNLTQLPP FNVHLQTKLV LLERLPRPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle