| Protein: | gi|24376235, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 570 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24376235, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
293.0 | [0..21] | [565..12] |
|
|
276.0 | [0..14] | [564..4] |
|
|
229.0 | [0..21] | [564..10] |
|
|
219.0 | [0..17] | [567..4] |
|
|
207.0 | [0..24] | [565..4] |
|
Region A: Residues: [1-448] |
1 11 21 31 41 51
| | | | | |
1 MTMSRDCILD STVDRYQHVG CRKSEGAHYT PTRLSQFVSE KIIEKLKKKE SIVIADPAIG 60
61 DGELILSFLS SLDSTDNIEV IGFDINLESI ELSKKRILNF YPNVRINLIH GDYLDYCING 120
121 NSDLCEYKLP KFDAIIANPP YVRTQVLGAE QSQFLSKNFG LKGRVDIYQA FLIGMSKCLS 180
181 EDGVAGVIVS NRFLTTKGTG ALRQSLHDLY DIYNIWDFGD TKLFEAAVLP AVLLFKMKAE 240
241 KPDFSTEFRS IYETNENEVD FAETPVDAIS LDGVVRCSNG KNYLIKAGLL DYDSSPKDIW 300
301 RVKDLTSEKW LDDVYRKTWA TFGEVGKIRV GVKTTADNVF IKSSWIDETG LVPELIRPLI 360
361 THHVAERFKQ SDAETKYILY THEMVNGKRK AIDIDKYPIS KMYLEQHRVQ LEGRNYVIEA 420
421 NRKWFEIWVP QSPLLWAENK IVFRDICE
|
| Detection Method: |  |
| Confidence: | 23.69897 |
| Match: | 1aqiA |
| Description: | DNA methylase TaqI |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA-methyltransferase activity | 3.31632172292823 | bayes_pls_golite062009 |
| transferase activity | 2.42370637689376 | bayes_pls_golite062009 |
| methyltransferase activity | 2.24556320310886 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 2.1789895493932 | bayes_pls_golite062009 |
| site-specific DNA-methyltransferase (adenine-specific) activity | 2.17404404470337 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 2.06810685308813 | bayes_pls_golite062009 |
| RNA methyltransferase activity | 1.36067005317038 | bayes_pls_golite062009 |
| rRNA methyltransferase activity | 0.740099749645209 | bayes_pls_golite062009 |
| DNA binding | 0.71035335478677 | bayes_pls_golite062009 |
| catalytic activity | 0.687068962721309 | bayes_pls_golite062009 |
| nucleic acid binding | 0.67545503347312 | bayes_pls_golite062009 |
| binding | 0.630667408122875 | bayes_pls_golite062009 |
| DNA (cytosine-5-)-methyltransferase activity | 0.6110460718981 | bayes_pls_golite062009 |
| N-methyltransferase activity | 0.49575399394607 | bayes_pls_golite062009 |
| histone methyltransferase activity (H4-R3 specific) | 0.0680860762896796 | bayes_pls_golite062009 |
|
Region A: Residues: [449-570] |
1 11 21 31 41 51
| | | | | |
1 EPTFWLDNKQ SIVNGDCYWM VNDYKKEETD LLWLVLAVAN SKFIEYFYDI KFNNKLYSNK 60
61 RRFISQYVEQ FPLPDPKSVI SVKMIMLAKS IYNCTDKQER NESEKLLDDL VWEAFDLPCP 120
121 IF
|
| Detection Method: | |
| Confidence: | 1.48 |
| Match: | 1aqjA |
| Description: | DNA methylase TaqI |
Matching Structure (courtesy of the PDB): |
|
