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View Structure Prediction Details

Protein: RVE8_ARATH
Organism: Arabidopsis thaliana
Length: 298 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RVE8_ARATH.

Description E-value Query
Range
Subject
Range
gi|45357118, gi|... - gi|79313165|ref|NP_001030662.1| myb family transcription factor [Arabidopsis thaliana], gi|62241832|...
212.0 [0..1] [286..1]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSPSRNPT NAEAPPPPPT STDAVAEGSS KKVRKPYTIT KSRESWTEEE HDKFLEALQL  60
   61 FDRDWKKIED FVGSKTVIQI RSHAQKYFLK VQKNGTLAHV PPPRPKRKAA HPYPQKASKN 120
  121 AQMPLQVSTS FTTTRNGD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.39794
Match: 2v1dB
Description: No description for 2v1dB was found.

Predicted Domain #2
Region A:
Residues: [139-298]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGYASWDDA SMLLNRVISP QHELATLRGA EADIGSKGLL NVSSPSTSGM GSSSRTVSGS  60
   61 EIVRKAKQPP VLHGVPDFAE VYNFIGSVFD PETRGHVEKL KEMDPINFET VLLLMRNLTV 120
  121 NLSNPDLEST RKVLLSYDNV TTELPSVVSL VKNSTSDKSA 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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