YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24376169, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	215 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24376169, gi|....

Description	E-value	Query Range	Subject Range
gi\|8052535 - gi\|8052535\|gb\|AAF71799.1\|AC013430_8 F3F9.13 [Arabidopsis thaliana]	170.0	[0..2]	[214..6]
gi\|17385642 - gi\|17385642\|dbj\|BAB32446.2\| glutathione S-transferase [Matricaria chamomilla]	168.0	[0..3]	[206..8]
gi\|7447302, gi\|2... - pir\|\|T06239 probable glutathione transferase (EC 2.5.1.18), 2,4-D inducible - soybean, gi\|2920666\|gb...	167.0	[0..3]	[214..7]
gst2 - gst2 putative glutathionine S-transferase 917708:918319 reverse MW:22159	167.0	[0..1]	[203..1]
gi\|22038178 - gi\|22038178\|gb\|AAG40562.1\| glutathione-S-transferase 2 [Aegilops tauschii]	166.0	[0..1]	[206..7]
gi\|11385535 - gi\|11385535\|gb\|AAG34850.1\|AF244707_1 glutathione S-transferase GST 42 [Zea mays]	165.0	[0..1]	[209..7]

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Predicted Domain #1

Region A:
Residues: [1-215]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELFYHPLSR YSQKVLIALY EKQANFYPRI TDLRDPLARK AFQQFYPSGK LPLLKTQEGQ  60
   61 LLPESSIIIE YLDTHFQNGT ELLPAEAERN LAVRLFDRLI DFDINNPLFQ LEKLKYTPEG 120
  121 HEFEIKQLEK QMFAQFQRLD SHLRQNHWVC GDSFTLADCA LIPCLSYSFA HLNLLDLDEL 180
  181 VRYWQQAQLR GAWMLVLEEV LLVEMEENTG IRSIP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	41.0
Match:	1aw9A
Description:	STRUCTURE OF GLUTATHIONE S-TRANSFERASE III IN APO FORM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.04263226837398	bayes_pls_golite062009
antioxidant activity	0.92550006805966	bayes_pls_golite062009
peroxidase activity	0.62384958394125	bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor	0.62384958394125	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: