YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24350909, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	155 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24350909, gi|....

Description	E-value	Query Range	Subject Range
gi\|37198129, gi\|... - gi\|37679386\|ref\|NP_933995.1\| molybdenum cofactor biosynthesis protein E [Vibrio vulnificus YJ016], g...	220.0	[0..6]	[153..4]
gi\|27362553, gi\|... - gi\|27366352\|ref\|NP_761880.1\| molybdenum cofactor biosynthesis protein E [Vibrio vulnificus CMCP6], g...	219.0	[0..6]	[153..4]
gi\|78509531, gi\|... - gi\|78691077\|ref\|ZP_00855708.1\| molybdenum cofactor biosynthesis protein E [Shewanella sp. MR-7], gi\|...	213.0	[0..1]	[154..1]
gi\|91188618, gi\|... - gi\|91227354\|ref\|ZP_01261743.1\| molybdenum cofactor biosynthesis protein E [Vibrio alginolyticus 12G0...	213.0	[0..6]	[153..4]
gi\|77814638, gi\|... - gi\|77814638\|ref\|ZP_00813896.1\| Molybdopterin biosynthesis MoaE [Shewanella putrefaciens CN-32], gi\|7...	212.0	[0..1]	[153..14]
gi\|82406400, gi\|... - gi\|82495516\|ref\|ZP_00881091.1\| molybdenum cofactor biosynthesis protein E [Shewanella sp. MR-4], gi\|...	212.0	[0..1]	[154..1]
gi\|124510501, gi... - gi\|124545898\|ref\|ZP_01705048.1\| molybdopterin biosynthesis MoaE [Shewanella putrefaciens 200], gi\|12... gi\|82742720, gi\|... - gi\|82742720\|ref\|ZP_00905402.1\| molybdenum cofactor biosynthesis protein E [Shewanella sp. W3-18-1], ...	212.0	[0..1]	[153..14]
gi\|28807085, gi\|... - gi\|28898866\|ref\|NP_798471.1\| molybdenum cofactor biosynthesis protein E [Vibrio parahaemolyticus RIM... gi\|28807085 - gi\|28807085\|dbj\|BAC60355.1\| molybdenum cofactor biosynthesis protein E [Vibrio parahaemolyticus RIMD...	212.0	[0..5]	[153..3]
gi\|85834275, gi\|... - gi\|86147950\|ref\|ZP_01066254.1\| Molybdenum cofactor biosynthesis protein E [Vibrio sp. MED222], gi\|85...	211.0	[0..5]	[153..9]
gi\|197335622, gi... - gi\|197335622\|ref\|YP_002155706.1\| molybdopterin converting factor, subunit 2 [Vibrio fischeri MJ11], ... gi\|59479651, gi\|... - gi\|59711550\|ref\|YP_204326.1\| molybdopterin synthase, large subunit [Vibrio fischeri ES114], gi\|59479...	211.0	[0..6]	[153..1]

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Predicted Domain #1

Region A:
Residues: [1-155]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLPNVRVQ TVDFNVADEY HQLAQDNSDG AVVTFVGKVR DFNDGSVVTD LTLEHYPGMT  60
   61 ERILEQIVAE ARERWPLNKV TVIHRVGTMA LGEQIVFIGV TSAHRKAAFA ACEFLIDFLK 120
  121 TKAPFWKLEA GDKGKNWVEA KDADEQAAQL WQHKS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	54.30103
Match:	1fm0E
Description:	Molybdopterin synthase subunit MoaE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.11092890710142	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: