YRC Public Data Repository - Protein Structure Prediction

Protein:	PSTB2_SHEON
Organism:	Shewanella oneidensis MR-1
Length:	249 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PSTB2_SHEON.

Description	E-value	Query Range	Subject Range
PSTB2_CALS4 - Phosphate import ATP-binding protein PstB 2 OS=Caldanaerobacter subterraneus subsp. tengcongensis (s... PSTB2_THETN, PSB... - Phosphate import ATP-binding protein pstB 2 OS=Thermoanaerobacter tengcongensis GN=pstB2 PE=3 SV=1, ...	328.0	[0..1]	[249..1]
gi\|76796281, gi\|... - gi\|76796281\|ref\|ZP_00778646.1\| Phosphate transport system permease protein 1 [Thermoanaerobacter eth... gi\|241883356, gi... - gi\|241904254\|ref\|ZP_04788958.1\| phosphate ABC transporter, ATPase subunit [Thermoanaerobacter brocki...	326.0	[0..1]	[249..1]
gi\|167040615, gi... - gi\|167040615\|ref\|YP_001663600.1\| phosphate ABC transporter, ATPase subunit [Thermoanaerobacter sp. X...	325.0	[0..1]	[249..1]
gi\|76586698, gi\|... - gi\|76797924\|ref\|ZP_00780185.1\| phosphate ABC transporter, ATP-binding protein [Streptococcus agalact... gi\|25011988, gi\|... - gi\|25011988\|ref\|NP_736383.1\| phosphate ABC transporter ATP-binding protein [Streptococcus agalactiae... gi\|77162007, gi\|... - gi\|77411981\|ref\|ZP_00788311.1\| phosphate ABC transporter, ATP-binding protein [Streptococcus agalact... gi\|77409120, gi\|... - gi\|77409120\|ref\|ZP_00785834.1\| phosphate ABC transporter, ATP-binding protein [Streptococcus agalact... gi\|77161063, gi\|... - gi\|77412923\|ref\|ZP_00789127.1\| phosphate ABC transporter, ATP-binding protein [Streptococcus agalact...	324.0	[0..1]	[249..1]
gi\|150016014, gi... - gi\|82749007\|ref\|ZP_00911478.1\| Phosphate transport system permease protein 1 [Clostridium beijerinck...	324.0	[0..1]	[249..1]
PSTB3_STRA1 - Phosphate import ATP-binding protein PstB 3 OS=Streptococcus agalactiae serotype Ia GN=pstB3 PE=3 SV... PSTB3_STRA1 - Phosphate import ATP-binding protein PstB 3 OS=Streptococcus agalactiae serotype Ia (strain ATCC 275... gi\|77176342, gi\|... - gi\|77405048\|ref\|ZP_00782148.1\| phosphate ABC transporter, ATP-binding protein [Streptococcus agalact...	323.0	[0..1]	[249..1]
PSTB_CARHZ - Phosphate import ATP-binding protein PstB OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 ...	323.0	[0..3]	[249..6]
PSTB_CLOTE - Phosphate import ATP-binding protein PstB OS=Clostridium tetani (strain Massachusetts / E88) GN=pstB... PSTB_CLOTE - Phosphate import ATP-binding protein PstB OS=Clostridium tetani GN=pstB PE=3 SV=1	319.0	[0..1]	[249..1]
gi\|67851250, gi\|... - gi\|67874182\|ref\|ZP_00504045.1\| ABC transporter [Clostridium thermocellum ATCC 27405], gi\|67851250\|gb...	319.0	[0..1]	[249..1]
PSTB3_STRA5 - Phosphate import ATP-binding protein PstB 3 OS=Streptococcus agalactiae serotype V (strain ATCC BAA-... PSTB3_STRA3 - Phosphate import ATP-binding protein PstB 3 OS=Streptococcus agalactiae serotype III (strain NEM316)... PSTB3_STRA3, PSB... - Phosphate import ATP-binding protein PstB 3 OS=Streptococcus agalactiae serotype III GN=pstB3 PE=3 S... PSTB3_STRA5, PSB... - Phosphate import ATP-binding protein PstB 3 OS=Streptococcus agalactiae serotype V GN=pstB3 PE=3 SV=...	319.0	[0..2]	[249..6]

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Predicted Domain #1

Region A:
Residues: [1-249]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKFEVTHLN LFYGENHALK DISIDIPARQ VTALIGPSGC GKSSLLRTLN RMNDLVEGVK  60
   61 ITGTVTFDGD DIYANIDVKH LRMSVGMVFQ KPNPFPMSIY ENIAFGLKAQ GVKDKAVLDA 120
  121 VVENSLRGAA LWEEVKTRLH TPAFGLSGGQ QQRLCIARAI AMEPEVILMD EPTSALDPIA 180
  181 THKIEELMDE LRKKFTIVIV THSMNQAKRI SDKTAFFWMG ELVEHGDTEQ IFNNPKDHRT 240
  241 QGYVSGHFG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	83.154902
Match:	2d62A
Description:	No description for 2d62A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits