| Protein: | gi|24350494, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 560 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24350494, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
397.0 | [0..1] | [560..1] |
|
|
396.0 | [0..1] | [560..1] |
|
|
396.0 | [0..1] | [560..1] |
|
|
380.0 | [0..1] | [560..1] |
|
|
380.0 | [0..1] | [560..1] |
|
|
375.0 | [0..1] | [560..1] |
|
|
373.0 | [0..1] | [560..1] |
|
|
367.0 | [0..1] | [559..1] |
|
|
357.0 | [0..1] | [560..1] |
|
|
354.0 | [0..4] | [560..5] |
|
Region A: Residues: [1-138] |
1 11 21 31 41 51
| | | | | |
1 MTAIKYFTPL LSLCLMACQT TDRPQPTASK EALSASMQTA SQPTPPPPAT MPDAVQRELN 60
61 ANTLMGGLTA PMETERRIDV SAHDVDARVF FPSLVQGTPF SVAVHPDVQG TISLSLKGVT 120
121 LSEAIQVVED IYGYEVSR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.508 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.508 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.420 | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.420 | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.315 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.315 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.285 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.276 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.254 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.239 | d.198.2 | Arp2/3 complex subunits |
| View | Download | 0.208 | d.110.4 | SNARE-like |
|
Region A: Residues: [139-267] |
1 11 21 31 41 51
| | | | | |
1 EGRILRVFPA GMRTETFPLN YLYMERDGLS LTSVSSGRIS DNNNSNNNNG NSNSNNGNSG 60
61 GNNSNSNSSN GSNASSNSSD STNGTFIRSR TKTDFWGELK ETLTAIVGDT GGGRQVVVTP 120
121 QAGLVTIRA
|
| Detection Method: | |
| Confidence: | 33.060481 |
| Match: | PF07655.1 |
| Description: | No description for PF07655.1 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.473 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.226 | N/A | N/A | b.61.7 | Description not found. |
| View | Download | 0.210 | N/A | N/A | f.4.1 | OMPA-like |
| View | Download | 0.210 | N/A | N/A | f.4.1 | OMPA-like |
| View | Download | 0.205 | N/A | N/A | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
|
Region A: Residues: [268-365] |
1 11 21 31 41 51
| | | | | |
1 YPNELRQVRA FLSSAESHLQ RQVILEAKIL EVTLSDGYQQ GIQWDNVLGH VGNTNINFGT 60
61 SAGTGLSDKI TSSLGGVTSL SIKGSDFNTM ISLLDTQG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.774 | N/A | N/A | d.137.1 | Monooxygenase (hydroxylase) regulatory protein |
| View | Download | 0.697 | N/A | N/A | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
| View | Download | 0.697 | N/A | N/A | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
| View | Download | 0.689 | N/A | N/A | a.280.1 | Description not found. |
| View | Download | 0.642 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.609 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.577 | N/A | N/A | d.58.48 | MTH1187-like |
| View | Download | 0.577 | N/A | N/A | d.58.48 | MTH1187-like |
| View | Download | 0.575 | N/A | N/A | d.58.17 | Metal-binding domain |
| View | Download | 0.398 | N/A | N/A | d.52.6 | BolA-like |
| View | Download | 0.376 | N/A | N/A | a.39.4 | Hypothetical protein MTH865 |
| View | Download | 0.350 | N/A | N/A | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.322 | N/A | N/A | d.52.8 | Description not found. |
| View | Download | 0.303 | N/A | N/A | d.58.48 | MTH1187-like |
|
Region A: Residues: [366-495] |
1 11 21 31 41 51
| | | | | |
1 DVDVLSSPRV TASNNQKAVI KVGTDEYFVT DVSSTTVAGT TPVTTPQVEL TPFFSGIALD 60
61 VTPQIDKDGN VLLHVHPSVI DVKEQTKDIK VSNESLELPL AQSEIRESDT VIRAASGDVV 120
121 VIGGLMKSEN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.359 | d.297.1 | Description not found. |
| View | Download | 0.274 | d.371.1 | Description not found. |
| View | Download | 0.274 | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.238 | b.159.2 | Description not found. |
| View | Download | 0.229 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.229 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.204 | b.61.1 | Avidin/streptavidin |
|
Region A: Residues: [496-560] |
1 11 21 31 41 51
| | | | | |
1 IEVVSQVPLL GDIPFVGELF KNRSKQKKKT ELIIMLKPTV VGNDTWKTEL ERSKTLLDRW 60
61 YPENK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.457 | N/A | N/A | a.189.1 | Description not found. |
| View | Download | 0.436 | N/A | N/A | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.436 | N/A | N/A | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.417 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.413 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.413 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.407 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.333 | N/A | N/A | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.288 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.257 | N/A | N/A | a.60.1 | SAM/Pointed domain |
