YRC Public Data Repository - Protein Structure Prediction

Protein:	F16PA_SHEON
Organism:	Shewanella oneidensis MR-1
Length:	325 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for F16PA_SHEON.

Description	E-value	Query Range	Subject Range
F16A1_CUPNH - Fructose-1,6-bisphosphatase class 1 1 OS=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / St...	465.0	[0..2]	[325..4]
F16A1_CUPMC - Fructose-1,6-bisphosphatase class 1 1 OS=Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / N...	465.0	[0..2]	[325..4]
F16PA_CUPPJ - Fructose-1,6-bisphosphatase class 1 OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=fbp...	459.0	[0..2]	[323..4]
F16PA_NITOC - Fructose-1,6-bisphosphatase class 1 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=fbp... gi\|207088868 - gi\|207088868\|gb\|EDZ66140.1\| fructose-1,6-bisphosphatase [Nitrosococcus oceani AFC27] gi\|224409214, gi... - gi\|254435757\|ref\|ZP_05049264.1\| fructose-1,6-bisphosphatase [Nitrosococcus oceani AFC27], gi\|2244092...	459.0	[0..4]	[321..7]
gi\|167581015 - gi\|167581015\|ref\|ZP_02373889.1\| fructose-1,6-bisphosphatase [Burkholderia thailandensis TXDOH] F16PA_BURTA - Fructose-1,6-bisphosphatase class 1 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 1...	458.0	[0..2]	[323..7]
gi\|84361088 - gi\|84361088\|ref\|ZP_00985770.1\| COG0158: Fructose-1,6-bisphosphatase [Burkholderia dolosa AUO158]	458.0	[0..2]	[321..7]
F16A1_BURXL - Fructose-1,6-bisphosphatase class 1 1 OS=Burkholderia xenovorans (strain LB400) GN=fbp1 PE=3 SV=1	458.0	[0..2]	[324..7]
F16PA_BURS3 - Fructose-1,6-bisphosphatase class 1 OS=Burkholderia sp. (strain 383) GN=fbp PE=3 SV=1 F16PA_BURL3 - Fructose-1,6-bisphosphatase class 1 OS=Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086...	457.0	[0..2]	[321..7]
F16PA_AZOVD - Fructose-1,6-bisphosphatase class 1 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=fbp PE=... gi\|67158002, gi\|... - gi\|67158002\|ref\|ZP_00419092.1\| Inositol phosphatase/fructose-1,6-bisphosphatase [Azotobacter vinelan...	457.0	[0..3]	[321..5]
gi\|84357190 - gi\|84357190\|ref\|ZP_00982018.1\| COG0158: Fructose-1,6-bisphosphatase [Burkholderia cenocepacia PC184] F16PA_BURCC - Fructose-1,6-bisphosphatase class 1 OS=Burkholderia cenocepacia (strain MC0-3) GN=fbp PE=3 SV=1	456.0	[0..2]	[323..7]

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Predicted Domain #1

Region A:
Residues: [1-325]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTLAQHLTS KAVNESLAQL ILTLADTSKA ISHAVRHGAL AGVLGATEQE NVQGETQKKL  60
   61 DIITNDMLKD ALKADGTVRG LASEEEDHVV EVSANGQYLV CFDPLDGSSN IDINSLVGTI 120
  121 FSVLPAPQGE LTEASFLQSG RNQLAAGYVL YGPSTMLALT TGQGVQLFTL HPETNEFLLT 180
  181 NATMSISPDT SEFAINMSNQ RFWEAPMQTY IADLLLGKIG PREKSFNMRW IAAMVGDVHR 240
  241 VLSRGGIFTY PTDNKDPKKP YKLRLMYEAN PMAFLVEQAG GKASTGYETI LDIQPTQIHQ 300
  301 RVAVILGSAN EVDACLSYHG IDSRK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	124.0
Match:	1bk4A
Description:	Fructose-1,6-bisphosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
fructose 1,6-bisphosphate 1-phosphatase activity	4.65500634914117	bayes_pls_golite062009
carbohydrate phosphatase activity	3.16528473469754	bayes_pls_golite062009
fructose-2,6-bisphosphate 2-phosphatase activity	2.93988797179951	bayes_pls_golite062009
catalytic activity	2.13229228332707	bayes_pls_golite062009
phosphatase activity	1.80881730120084	bayes_pls_golite062009
phosphoric ester hydrolase activity	1.75330931312215	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	1.56919997723952	bayes_pls_golite062009
inositol or phosphatidylinositol phosphatase activity	1.22694473598142	bayes_pls_golite062009
binding	0.97662061117191	bayes_pls_golite062009
inositol-1(or 4)-monophosphatase activity	0.0921499329725725	bayes_pls_golite062009
hydrolase activity	0.06056335004637	bayes_pls_golite062009
protein binding	0.0338617836572318	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: