| Protein: | gi|24350318, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 585 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24350318, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
242.0 | [0..130] | [551..283] |
|
|
240.0 | [0..1] | [582..28] |
|
|
237.0 | [0..126] | [557..263] |
|
|
236.0 | [0..2] | [552..15] |
|
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236.0 | [0..2] | [552..15] |
|
|
236.0 | [0..2] | [552..15] |
|
|
236.0 | [0..2] | [552..15] |
|
|
234.0 | [0..2] | [552..15] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MLVLILLSSS LAIFAIINLS YSLGDAKAIN ASGSLRMQSY RLMFYANSGS EAAQEKITEF 60
61 ENTLHSEALH PSKSWLSPKK IAAQYQLVID KWLVMKYYIE QENSRDYAAS LKDFVDTIDL 120
121 LVLEM
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.989 | a.24.4 | Hemerythrin |
| View | Download | 0.963 | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.960 | a.24.3 | Cytochromes |
| View | Download | 0.940 | a.24.3 | Cytochromes |
| View | Download | 0.886 | i.11.1 | Computational models partly based on NMR data |
|
Region A: Residues: [126-230] |
1 11 21 31 41 51
| | | | | |
1 EHHAAFKLRL LAASQIFGLG LMLSIAFLAV RFTKRKVVVP LQQLMESANT ISKGNFEIEM 60
61 PETEYIELTA LTDALQKTAR ELATLYGNLE SQVAEKTLAL TRANN
|
| Detection Method: | |
| Confidence: | 3.73 |
| Match: | 2f95B |
| Description: | M intermediate structure of sensory rhodopsin II/transducer complex in combination with the ground state structure |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [231-316] |
1 11 21 31 41 51
| | | | | |
1 ELAFLYDTLL TLNAKKLDYK ALKAALNQLK DYESIDYLRL IIQYPEQELE MIEANGGWPE 60
61 SADNSTRFPL QFEQANLGYL ELISAQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [317-585] |
1 11 21 31 41 51
| | | | | |
1 DINTPLFKNF AIMLTRSIVI HNATEQRQQL ALMEERGVIA RELHDSLGQV LSFLKIQISL 60
61 LRKNLDHSCR SPAVEVQLTE INEGVSTAYV QLRELLSTFR LTIKEPNLKN AMEAMLEQLR 120
121 ANTDIKIHLD YKLSPQWLEA KQHIHILQIT REATLNAIKH ANASHINIRC YKDDRGMVNI 180
181 SVSDNGVGIG HIKERDQHFG IGIMHERASK LDGEVVFSSN DTHTNSTATT EQRHQENPDS 240
241 PLESHNTSNL SQGTIVTLIF PSQQEPTHG
|
| Detection Method: | |
| Confidence: | 40.30103 |
| Match: | 2c2aA |
| Description: | Structure of the entire cytoplasmic portion of a sensor histidine kinase protein |
Matching Structure (courtesy of the PDB): |
|
