| Protein: | gi|24350214, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 369 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24350214, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
243.0 | [0..1] | [369..1] |
|
Region A: Residues: [1-369] |
1 11 21 31 41 51
| | | | | |
1 MKKTFISASV ASVLALASFG ALAEGPSFYG RLELALTNTE TGATLQSGTN GVDTKNYADE 60
61 NNGGTYLENN FSLLGVKGSE KIANGYDVVY QMEFQVENTS GSGDVFKARN TFLGLKTNAG 120
121 TVLVGRNDTV FKQAEGNVDV FGNTNADIDR LVGAQTRSAD GVWYYSPKIA DLVTLNATYL 180
181 FDDNDTTAKT NESLYALSAT LGDSKFKDQN YYLAVAYNKG IAGIDAYRGV AQVKFGDFKV 240
241 GGLFQNSESV TNSSVDGNTY FVNVVYTLNG VNLKAEYGVD EAGFGNYYNN VNKYTEVQII 300
301 DGKPTVVAKS TTGTDISVQN FNVGADYRFS KSTMVYGQYS MYRGDHVVAG NKVDLQDDNV 360
361 FSVGVRYDF
|
| Detection Method: |  |
| Confidence: | 39.69897 |
| Match: | 1osmA |
| Description: | Porin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 2.60507547654721 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.86109425700917 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.424956094980482 | bayes_pls_golite062009 |
