YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24375361, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	596 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24375361, gi|....

Description	E-value	Query Range	Subject Range
gi\|213052458 - gi\|213052458\|ref\|ZP_03345336.1\| putative arylsulfate sulfotransferase [Salmonella enterica subsp. en... gi\|29139087, gi\|... - gi\|29143453\|ref\|NP_806795.1\| putative arylsulfate sulfotransferase [Salmonella enterica subsp. enter... gi\|214001835 - gi\|214001835\|ref\|ZP_03412570.1\| putative arylsulfate sulfotransferase [Salmonella enterica subsp. en... gi\|16761966 - gi\|16761966\|ref\|NP_457583.1\| putative arylsulfate sulfotransferase [Salmonella enterica subsp. enter... gi\|213645900 - gi\|213645900\|ref\|ZP_03375953.1\| putative arylsulfate sulfotransferase [Salmonella enterica subsp. en... gi\|213609640 - gi\|213609640\|ref\|ZP_03369466.1\| putative arylsulfate sulfotransferase [Salmonella enterica subsp. en... gi\|16504269, gi\|... - gi\|25513022\|pir\|\|AG0890 probable arylsulfate sulfotransferase [imported] - Salmonella enterica subsp... gi\|213425611 - gi\|213425611\|ref\|ZP_03358361.1\| putative arylsulfate sulfotransferase [Salmonella enterica subsp. en...	811.0	[0..2]	[594..6]
gi\|56129389, gi\|... - gi\|56415132\|ref\|YP_152207.1\| arylsulfate sulfotransferase [Salmonella enterica subsp. enterica serov... gi\|197095538, gi... - gi\|197364061\|ref\|YP_002143698.1\| probable arylsulfate sulfotransferase [Salmonella enterica subsp. e...	809.0	[0..2]	[594..6]
gi\|62181706, gi\|... - gi\|62181706\|ref\|YP_218123.1\| putative arylsulfate sulfotransferase [Salmonella enterica subsp. enter... gi\|224469521, gi... - gi\|224584993\|ref\|YP_002638792.1\| probable arylsulfate sulfotransferase [Salmonella enterica subsp. e...	807.0	[0..2]	[594..6]
gi\|15777486 - gi\|15777486\|gb\|AAK31641.1\| arylsulfate sulfotransferase [Citrobacter freundii] gi\|237729967, gi... - gi\|237729967\|ref\|ZP_04560448.1\| conserved hypothetical protein [Citrobacter sp. 30_2], gi\|226908573\|...	804.0	[0..2]	[594..6]
gi\|27448006\|gb\|A... - arylsulfate sulfotransferase ASST [Salmonella typhimurium] gi\|27448006 - gi\|27448006\|gb\|AAO13757.1\|AF295574_1 arylsulfate sulfotransferase ASST [Salmonella typhimurium]	797.0	[0..2]	[594..6]
gi\|1894815 - gi\|1894815\|gb\|AAB49808.1\| Klebsiella sp. arylsulfate sulfotransferase gi\|115514476, gi... - gi\|117625352\|ref\|YP_854851.1\| arylsulfate sulfotransferase [Escherichia coli APEC O1], gi\|115514476\|... gi\|218428905, gi... - gi\|218691341\|ref\|YP_002399553.1\| arylsulfate sulfotransferase [Escherichia coli ED1a], gi\|218428905\|... gi\|91212465, gi\|... - gi\|91212465\|ref\|YP_542451.1\| arylsulfate sulfotransferase [Escherichia coli UTI89], gi\|91074039\|gb\|A... gi\|218366892, gi... - gi\|218560123\|ref\|YP_002393036.1\| arylsulfate sulfotransferase [Escherichia coli S88], gi\|218366892\|e... gi\|237706203, gi... - gi\|237706203\|ref\|ZP_04536684.1\| arylsulfate sulfotransferase [Escherichia sp. 3_2_53FAA], gi\|2268992... gi\|227887757, gi... - gi\|227887757\|ref\|ZP_04005562.1\| arylsulfate sulfotransferase [Escherichia coli 83972], gi\|227835153\|...	789.0	[0..2]	[594..6]
ASST_ECOL6 - Arylsulfate sulfotransferase AssT OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=...	788.0	[0..2]	[594..6]
gi\|110643284, gi... - gi\|110643284\|ref\|YP_671014.1\| arylsulfate sulfotransferase [Escherichia coli 536], gi\|110344876\|gb\|A... gi\|170517753, gi... - gi\|170680035\|ref\|YP_001745312.1\| arylsulfate sulfotransferase [Escherichia coli SMS-3-5], gi\|1705177...	787.0	[0..2]	[594..6]
gi\|5281108 - gi\|5281108\|gb\|AAD41460.1\|AF012826_1 arylsulfate sulfotransferase [Enterobacter amnigenus]	784.0	[0..2]	[594..6]
gi\|75240495 - gi\|75240495\|ref\|ZP_00724423.1\| hypothetical protein EcolF_01002420 [Escherichia coli F11]	775.0	[0..24]	[594..1]

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Predicted Domain #1

Region A:
Residues: [1-596]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKNILGVAV ILALSQSIIS SESNAAGFKP APPAGQLGAI LVNPYGNSPL TAILELSSKK  60
   61 PTNVTVTVHG KGNNGVDISY PVGQRTMNTH DGIPLFGLYA DHNNQVTVKY TLDGKNLTEK 120
  121 YNVLTGAISN KYVDNRSTTV MQEVKVKTVA KGFENRLYMV NSHTYNQQGS DIHWSGQKGK 180
  181 DAGIFESTPS MGSLTFDNAP MTYVVDTKGE IRWWLEQDAV YDGSDVDLNK RGYFMGLHDN 240
  241 GKGGITFVQG QRYGHFDLLG NVESRRLPRG YIDASHEHNL MPNGHSLIRA AKSNYENDRG 300
  301 DVVHTVRDHI LEIDQQGNLV DVWNLATILD PYRDALLNAL DMGAVCLNVD MDNIGKTAEV 360
  361 KIDAPYGDIP GVVAGRNWAH INSVEYDPKD DSIILSFRHQ GVAKVTRDKK VKWILAPSEG 420
  421 WNKELSTKLL TPVDSKGKKI SCTSKGVCDG DFDFTYTQHT AWLNNKTGTL TVLDNGDGRG 480
  481 YEQPALPTMK YSRFVEYKIN EENMTVEQIW EYGKERGYEW YSPITSNVEY MEDKDTMFGF 540
  541 GGSVDLYNPG KPTIGRINEI GYDDKKVKVE IDVLSDKPNS PHYRAIILNP SSQFGN

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.11
Match:	1g72A
Description:	Methanol dehydrogenase, heavy chain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.67185341838075	bayes_pls_golite062009
oxidoreductase activity	0.283100739275545	bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors	0.131420136586542	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: