YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24375272, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	194 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24375272, gi|....

Description	E-value	Query Range	Subject Range
CYAB_AERHY - Adenylate cyclase CyaB OS=Aeromonas hydrophila GN=cyaB PE=1 SV=3	224.0	[0..14]	[188..3]
gi\|82742597, gi\|... - gi\|82742597\|ref\|ZP_00905284.1\| Adenylyl cyclase CyaB [Shewanella sp. W3-18-1], gi\|82720059\|gb\|EAP549... gi\|77811032, gi\|... - gi\|77814038\|ref\|ZP_00813307.1\| Adenylyl cyclase CyaB [Shewanella putrefaciens CN-32], gi\|77811032\|gb...	218.0	[0..1]	[193..1]
gi\|160874031, gi... - gi\|160874031\|ref\|YP_001553347.1\| putative adenylyl cyclase CyaB [Shewanella baltica OS195], gi\|16085...	217.0	[0..1]	[193..1]
gi\|68543270, gi\|... - gi\|68543270\|ref\|ZP_00582981.1\| Adenylyl cyclase CyaB [Shewanella baltica OS155], gi\|68519054\|gb\|EAN4...	215.0	[0..1]	[193..1]
gi\|46915877, gi\|... - gi\|54302455\|ref\|YP_132448.1\| putative adenylate cyclase CyaB [Photobacterium profundum SS9], gi\|4691...	208.0	[0..13]	[189..1]
gi\|114046348, gi... - gi\|78690181\|ref\|ZP_00854832.1\| Adenylyl cyclase CyaB [Shewanella sp. MR-7], gi\|78510460\|gb\|EAP23831....	206.0	[0..1]	[193..11]
gi\|82496963, gi\|... - gi\|82496963\|ref\|ZP_00882525.1\| Adenylyl cyclase CyaB [Shewanella sp. MR-4], gi\|82405090\|gb\|EAP45768....	206.0	[0..1]	[193..1]
gi\|28806752 - gi\|28806752\|dbj\|BAC60023.1\| putative adenylate cyclase [Vibrio parahaemolyticus RIMD 2210633] gi\|28898534, gi\|... - gi\|28898534\|ref\|NP_798139.1\| putative adenylate cyclase [Vibrio parahaemolyticus RIMD 2210633], gi\|2...	206.0	[0..14]	[191..4]
gi\|78506243, gi\|... - gi\|78686107\|ref\|ZP_00850879.1\| Adenylyl cyclase CyaB [Shewanella sp. ANA-3], gi\|78506243\|gb\|EAP19764...	206.0	[0..1]	[189..1]
gi\|45440797, gi\|... - gi\|45440797\|ref\|NP_992336.1\| adenylate cyclase 2 [Yersinia pestis biovar Microtus str. 91001], gi\|45... gi\|21959923, gi\|... - gi\|22126888\|ref\|NP_670311.1\| adenylate cyclase 2 [Yersinia pestis KIM], gi\|21959923\|gb\|AAM86562.1\|AE... gi\|15979240, gi\|... - gi\|218928341\|ref\|YP_002346216.1\| adenylate cyclase 2 [Yersinia pestis CO92], gi\|16121473\|ref\|NP_4047... gi\|165938333, gi... - gi\|89102853\|ref\|ZP_01175459.1\| COG1437: Adenylate cyclase, class 2 (thermophilic) [Yersinia pestis b... gi\|51595563, gi\|... - gi\|51595563\|ref\|YP_069754.1\| adenylate cyclase 2 [Yersinia pseudotuberculosis IP 32953], gi\|51588845... gi\|108806886, gi... - gi\|108806886\|ref\|YP_650802.1\| adenylate cyclase 2 [Yersinia pestis Antiqua], gi\|108778799\|gb\|ABG1285... gi\|186697653, gi... - gi\|186894627\|ref\|YP_001871739.1\| adenylyl cyclase CyaB [Yersinia pseudotuberculosis PB1/+], gi\|18669... gi\|167466746 - gi\|167466746\|ref\|ZP_02331450.1\| adenylate cyclase, class IV [Yersinia pestis FV-1] gi\|229841121, gi... - gi\|229841121\|ref\|ZP_04461280.1\| adenylate cyclase 2 [Yersinia pestis biovar Orientalis str. PEXU2], ... gi\|108812959, gi... - gi\|229903391\|ref\|ZP_04518504.1\| adenylate cyclase 2 [Yersinia pestis Nepal516], gi\|229679161\|gb\|EEO7... gi\|229689572, gi... - gi\|229843225\|ref\|ZP_04463371.1\| adenylate cyclase 2 [Yersinia pestis biovar Orientalis str. India 19... Q66D30\|Q66D30_YERPS - Adenylate cyclase 2 - Yersinia pseudotuberculosis gi\|229704042, gi... - gi\|229894157\|ref\|ZP_04509343.1\| adenylate cyclase 2 [Yersinia pestis Pestoides A], gi\|229704042\|gb\|E... gi\|166009957, gi... - gi\|166009957\|ref\|ZP_02230855.1\| adenylate cyclase, class IV [Yersinia pestis biovar Antiqua str. E19... gi\|165923619, gi... - gi\|165924559\|ref\|ZP_02220391.1\| adenylate cyclase, class IV [Yersinia pestis biovar Orientalis str. ... gi\|162418207, gi... - gi\|77636454\|ref\|ZP_00798528.1\| COG1437: Adenylate cyclase, class 2 (thermophilic) [Yersinia pestis A... gi\|167400195, gi... - gi\|167400195\|ref\|ZP_02305708.1\| adenylate cyclase, class IV [Yersinia pestis biovar Antiqua str. UG0... gi\|117674325, gi... - gi\|77632178\|ref\|ZP_00794764.1\| COG1437: Adenylate cyclase, class 2 (thermophilic) [Yersinia pseudotu... gi\|149366827, gi... - gi\|149366827\|ref\|ZP_01888861.1\| adenylate cyclase 2 [Yersinia pestis CA88-4125], gi\|149291201\|gb\|EDM... gi\|166211757, gi... - gi\|166211757\|ref\|ZP_02237792.1\| adenylate cyclase, class IV [Yersinia pestis biovar Antiqua str. B42... gi\|145599787, gi... - gi\|145599787\|ref\|YP_001163863.1\| adenylate cyclase 2 [Yersinia pestis Pestoides F], gi\|145211483\|gb\|... gi\|167056698, gi... - gi\|167423849\|ref\|ZP_02315602.1\| adenylate cyclase, class IV [Yersinia pestis biovar Mediaevalis str.... gi\|166962301, gi... - gi\|167419560\|ref\|ZP_02311313.1\| adenylate cyclase, class IV [Yersinia pestis biovar Orientalis str. ... gi\|25517039 - pir\|\|AH0144 adenylate cyclase (EC 4.6.1.1) [imported] - Yersinia pestis (strain CO92)	204.0	[0..13]	[189..1]

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Predicted Domain #1

Region A:
Residues: [1-194]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNLMPAELA PQINAHFNGK FEVELKYRLA DREAFWARLS AKSPEVMLED NLEHDCYFDS  60
   61 PSASLAAQHK SLCIREMQPS GIRLWIVKGP EKDRCEAVNI TDANKAKSML RTLGYQCVLE 120
  121 IKKRRSVYFL GQFHLTLDRL EGLGDFAELA IMTDDEAMLP VYEAQLVALA AELGLNESQR 180
  181 EFLSYRQLQQ ALQQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	53.30103
Match:	2fjtA
Description:	No description for 2fjtA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits