YRC Public Data Repository - Protein Structure Prediction

Protein:	CYSH_SHEON
Organism:	Shewanella oneidensis MR-1
Length:	245 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CYSH_SHEON.

Description	E-value	Query Range	Subject Range
CYSH_SALCH - Phosphoadenosine phosphosulfate reductase OS=Salmonella choleraesuis GN=cysH PE=3 SV=1 CYSH_SALCH - Phosphoadenosine phosphosulfate reductase OS=Salmonella choleraesuis (strain SC-B67) GN=cysH PE=3 SV... CYSH_SALCH - Phosphoadenosine phosphosulfate reductase OS=Salmonella choleraesuis GN=cysH PE=3 SV=1	212.0	[0..1]	[243..1]
gi\|37199900, gi\|... - gi\|37681149\|ref\|NP_935758.1\| phosphoadenosine phosphosulfate reductase [Vibrio vulnificus YJ016], gi...	212.0	[0..2]	[244..28]
gi\|238896235, gi... - gi\|238896235\|ref\|YP_002920971.1\| phosphoadenosine phosphosulfate reductase [Klebsiella pneumoniae NT... gi\|110180263 - gi\|110180263\|gb\|ABG54372.1\| PAPS reductase [Klebsiella pneumoniae] CYSH_KLEP7 - Phosphoadenosine phosphosulfate reductase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 70...	210.0	[0..1]	[243..1]
lcl\|NC_016856.1_... - [gene=cysH] [protein=phosphoadenosine phosphosulfate reductase] [protein_id=YP_005239060.1] [locatio... CYSH_SALTY - Phosphoadenosine phosphosulfate reductase OS=Salmonella typhimurium GN=cysH PE=3 SV=3 gi\|205328716, gi... - gi\|205328716\|gb\|EDZ15480.1\| phosphoadenosine phosphosulfate reductase [Salmonella enterica subsp. en... gi\|168261920, gi... - gi\|205349197\|gb\|EDZ35828.1\| phosphoadenosine phosphosulfate reductase [Salmonella enterica subsp. en... gi\|199604862, gi... - gi\|200387764\|ref\|ZP_03214376.1\| phosphoadenosine phosphosulfate reductase [Salmonella enterica subsp... CYSH_SALTY - Phosphoadenosine phosphosulfate reductase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 70... CYSH_SALTY - Phosphoadenosine phosphosulfate reductase OS=Salmonella typhimurium GN=cysH PE=3 SV=3	210.0	[0..1]	[243..1]
CYSH_VIBVU - Phosphoadenosine phosphosulfate reductase OS=Vibrio vulnificus (strain CMCP6) GN=cysH PE=3 SV=1 CYSH_VIBVU - Phosphoadenosine phosphosulfate reductase OS=Vibrio vulnificus GN=cysH PE=3 SV=1	210.0	[0..2]	[244..7]
gi\|77976021 - gi\|77976021\|ref\|ZP_00831554.1\| COG0175: 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS...	209.0	[0..1]	[243..1]
CYSH_SALPK - Phosphoadenosine phosphosulfate reductase OS=Salmonella paratyphi A (strain AKU_12601) GN=cysH PE=3 ... CYSH_SALPA - Phosphoadenosine phosphosulfate reductase OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=c... CYSH_SALPA - Phosphoadenosine phosphosulfate reductase OS=Salmonella paratyphi A GN=cysH PE=3 SV=1	209.0	[0..1]	[243..1]
CYSH_SALTI - Phosphoadenosine phosphosulfate reductase OS=Salmonella typhi GN=cysH PE=3 SV=3 gi\|16761718 - gi\|16761718\|ref\|NP_457335.1\| phosphoadenosine phosphosulfate reductase [Salmonella enterica subsp. e... CYSH_SALTI - Phosphoadenosine phosphosulfate reductase OS=Salmonella typhi GN=cysH PE=3 SV=3 gi\|29138835, gi\|... - gi\|29143202\|ref\|NP_806544.1\| phosphoadenosine phosphosulfate reductase [Salmonella enterica subsp. e... gi\|213648296 - gi\|213648296\|ref\|ZP_03378349.1\| phosphoadenosine phosphosulfate reductase [Salmonella enterica subsp... gi\|213609584 - gi\|213609584\|ref\|ZP_03369410.1\| phosphoadenosine phosphosulfate reductase [Salmonella enterica subsp... gi\|213424929 - gi\|213424929\|ref\|ZP_03357679.1\| phosphoadenosine phosphosulfate reductase [Salmonella enterica subsp... gi\|213023691 - gi\|213023691\|ref\|ZP_03338138.1\| phosphoadenosine phosphosulfate reductase [Salmonella enterica subsp...	209.0	[0..1]	[243..1]
CYSH_PHOPR - Phosphoadenosine phosphosulfate reductase OS=Photobacterium profundum (strain SS9) GN=cysH PE=3 SV=1 CYSH_PHOPR - Phosphoadenosine phosphosulfate reductase OS=Photobacterium profundum GN=cysH PE=3 SV=1	209.0	[0..1]	[244..1]

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Predicted Domain #1

Region A:
Residues: [1-245]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSELKALL TAPKSVQQAE LERINRFLAG LTAQERVLWG LAYLPGNHAL SSSFGIQAAV  60
   61 MLHMVSQVQS DIPVILTDTG YLFPETYQFI DQLTERLSLN LKVYQAPITS AWQEARFGQL 120
  121 WEQGVEGLER YNRLNKVEPM QRALAELEVG TWFAGLRRSQ SSTREELPIL AIHGSRFKLL 180
  181 PIIEWSNKDV HLYLTQFDLP YHPLWEQGYV SVGDTHSSKP LELGMTEEET RFNGLKRECG 240
  241 LHYEI

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	50.69897
Match:	2o8vA
Description:	No description for 2o8vA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits