YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24375202, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	261 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24375202, gi|....

Description	E-value	Query Range	Subject Range
gi\|242258488, gi... - gi\|242258488\|ref\|ZP_04803284.1\| purine nucleoside phosphorylase [Thermoanaerobacter sp. X513], gi\|24... gi\|241902447, gi... - gi\|241902447\|ref\|ZP_04787181.1\| purine nucleoside phosphorylase [Thermoanaerobacter brockii subsp. f... DEOD_THEPX - Purine nucleoside phosphorylase DeoD-type OS=Thermoanaerobacter sp. (strain X514) GN=deoD PE=3 SV=1 DEOD_THEP3 - Purine nucleoside phosphorylase DeoD-type OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 ...	178.0	[0..1]	[256..1]
DEOD_BACCE - Purine nucleoside phosphorylase deoD-type OS=Bacillus cereus GN=deoD PE=3 SV=1	177.0	[0..1]	[258..1]
gi\|228750541, gi... - gi\|229010867\|ref\|ZP_04168064.1\| Purine nucleoside phosphorylase [Bacillus mycoides DSM 2048], gi\|228... gi\|229074755, gi... - gi\|229074755\|ref\|ZP_04207774.1\| Purine nucleoside phosphorylase [Bacillus cereus Rock4-18], gi\|22870... gi\|229115010, gi... - gi\|229115010\|ref\|ZP_04244421.1\| Purine nucleoside phosphorylase [Bacillus cereus Rock1-3], gi\|228668... gi\|228651075, gi... - gi\|229132369\|ref\|ZP_04261223.1\| Purine nucleoside phosphorylase [Bacillus cereus BDRD-ST196], gi\|228... gi\|229096054, gi... - gi\|229096054\|ref\|ZP_04227028.1\| Purine nucleoside phosphorylase [Bacillus cereus Rock3-29], gi\|22868... DEOD_BACCZ - Purine nucleoside phosphorylase DeoD-type OS=Bacillus cereus (strain ZK / E33L) GN=deoD PE=3 SV=1 gi\|229102166, gi... - gi\|229102166\|ref\|ZP_04232876.1\| Purine nucleoside phosphorylase [Bacillus cereus Rock3-28], gi\|22868... gi\|229166405, gi... - gi\|229166405\|ref\|ZP_04294161.1\| Purine nucleoside phosphorylase [Bacillus cereus AH621], gi\|22861697...	177.0	[0..1]	[258..1]
DEOD_BACC3 - Purine nucleoside phosphorylase DeoD-type OS=Bacillus cereus (strain 03BB102) GN=deoD PE=3 SV=1 DEOD_BACAC - Purine nucleoside phosphorylase DeoD-type OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=deoD... gi\|228852415, gi... - gi\|228907194\|ref\|ZP_04071055.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis IBL 200], gi... gi\|228845470, gi... - gi\|228914137\|ref\|ZP_04077755.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis serovar puls... gi\|228839471, gi... - gi\|228920272\|ref\|ZP_04083620.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis serovar huaz... gi\|228832969, gi... - gi\|228926593\|ref\|ZP_04089662.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis serovar pond... gi\|228945162, gi... - gi\|228945162\|ref\|ZP_04107518.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis serovar mont... DEOD_BACAH - Purine nucleoside phosphorylase DeoD-type OS=Bacillus thuringiensis (strain Al Hakam) GN=deoD PE=3 S... gi\|228951939, gi... - gi\|228951939\|ref\|ZP_04114037.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis serovar kurs... gi\|228964535, gi... - gi\|228964535\|ref\|ZP_04125645.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis serovar sott... gi\|229016819, gi... - gi\|229016819\|ref\|ZP_04173748.1\| Purine nucleoside phosphorylase [Bacillus cereus AH1273], gi\|2287444... gi\|228738273, gi... - gi\|229023025\|ref\|ZP_04179541.1\| Purine nucleoside phosphorylase [Bacillus cereus AH1272], gi\|2287382... gi\|228732054, gi... - gi\|229029241\|ref\|ZP_04185332.1\| Purine nucleoside phosphorylase [Bacillus cereus AH1271], gi\|2287320... gi\|228720062, gi... - gi\|229058198\|ref\|ZP_04196586.1\| Purine nucleoside phosphorylase [Bacillus cereus AH603], gi\|22872006... gi\|228704619, gi... - gi\|229078746\|ref\|ZP_04211300.1\| Purine nucleoside phosphorylase [Bacillus cereus Rock4-2], gi\|228704... gi\|228692787, gi... - gi\|229090520\|ref\|ZP_04221756.1\| Purine nucleoside phosphorylase [Bacillus cereus Rock3-42], gi\|22869... gi\|167634309, gi... - gi\|167634309\|ref\|ZP_02392630.1\| purine nucleoside phosphorylase [Bacillus anthracis str. A0442], gi\|... gi\|165872644, gi... - gi\|165872644\|ref\|ZP_02217274.1\| purine nucleoside phosphorylase [Bacillus anthracis str. A0488], gi\|... gi\|170689251, gi... - gi\|170689251\|ref\|ZP_02880447.1\| purine nucleoside phosphorylase [Bacillus anthracis str. A0465], gi\|... gi\|167510435, gi... - gi\|167641642\|ref\|ZP_02399888.1\| purine nucleoside phosphorylase [Bacillus anthracis str. A0193], gi\|... gi\|177651583, gi... - gi\|177651583\|ref\|ZP_02934372.1\| purine nucleoside phosphorylase [Bacillus anthracis str. A0174], gi\|... gi\|170706236, gi... - gi\|170706236\|ref\|ZP_02896697.1\| purine nucleoside phosphorylase [Bacillus anthracis str. A0389], gi\|... gi\|196036841, gi... - gi\|196036841\|ref\|ZP_03104230.1\| purine nucleoside phosphorylase [Bacillus cereus W], gi\|195990570\|gb... gi\|190568082, gi... - gi\|190568082\|ref\|ZP_03020992.1\| purine nucleoside phosphorylase [Bacillus anthracis Tsiankovskii-I],... DEOD_BACCE - Purine nucleoside phosphorylase DeoD-type OS=Bacillus cereus GN=deoD PE=1 SV=2 gi\|196047632, gi... - gi\|196047632\|ref\|ZP_03114839.1\| purine nucleoside phosphorylase [Bacillus cereus 03BB108], gi\|196021... gi\|196038877, gi... - gi\|196038877\|ref\|ZP_03106184.1\| purine nucleoside phosphorylase [Bacillus cereus NVH0597-99], gi\|196... gi\|206978277, gi... - gi\|206978277\|ref\|ZP_03239155.1\| purine nucleoside phosphorylase [Bacillus cereus H3081.97], gi\|20674... gi\|206737464, gi... - gi\|206968544\|ref\|ZP_03229500.1\| purine nucleoside phosphorylase [Bacillus cereus AH1134], gi\|2067374... DEOD_BACC2 - Purine nucleoside phosphorylase DeoD-type OS=Bacillus cereus (strain G9842) GN=deoD PE=3 SV=1 DEOD_BACC7 - Purine nucleoside phosphorylase DeoD-type OS=Bacillus cereus (strain AH187) GN=deoD PE=3 SV=1 DEOD_BACCQ - Purine nucleoside phosphorylase DeoD-type OS=Bacillus cereus (strain Q1) GN=deoD PE=3 SV=1 DEOD_BACC0 - Purine nucleoside phosphorylase DeoD-type OS=Bacillus cereus (strain AH820) GN=deoD PE=3 SV=1 DEOD_BACWK - Purine nucleoside phosphorylase DeoD-type OS=Bacillus weihenstephanensis (strain KBAB4) GN=deoD PE=3... DEOD_BACAN - Purine nucleoside phosphorylase DeoD-type OS=Bacillus anthracis GN=deoD PE=1 SV=1 DEOD_BACHK - Purine nucleoside phosphorylase deoD-type OS=Bacillus thuringiensis subsp. konkukian GN=deoD PE=3 SV... gi\|228662223, gi... - gi\|229121104\|ref\|ZP_04250341.1\| Purine nucleoside phosphorylase [Bacillus cereus 95/8201], gi\|228662... DEOD_BACHK - Purine nucleoside phosphorylase DeoD-type OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) ... gi\|228645148, gi... - gi\|229138256\|ref\|ZP_04266851.1\| Purine nucleoside phosphorylase [Bacillus cereus BDRD-ST26], gi\|2286... gi\|49184389, gi\|... - gi\|49184389\|ref\|YP_027641.1\| purine nucleoside phosphorylase [Bacillus anthracis str. Sterne], gi\|49... gi\|229149761, gi... - gi\|229149761\|ref\|ZP_04277991.1\| Purine nucleoside phosphorylase [Bacillus cereus m1550], gi\|22863379... gi\|47526757, gi\|... - gi\|47526757\|ref\|YP_018106.1\| purine nucleoside phosphorylase [Bacillus anthracis str. 'Ames Ancestor... gi\|229160513, gi... - gi\|229160513\|ref\|ZP_04288508.1\| Purine nucleoside phosphorylase [Bacillus cereus R309803], gi\|228622... gi\|228611189, gi... - gi\|229172201\|ref\|ZP_04299765.1\| Purine nucleoside phosphorylase [Bacillus cereus MM3], gi\|228611189\|... gi\|229177970, gi... - gi\|229177970\|ref\|ZP_04305342.1\| Purine nucleoside phosphorylase [Bacillus cereus 172560W], gi\|228605... gi\|229183758, gi... - gi\|229183758\|ref\|ZP_04310975.1\| Purine nucleoside phosphorylase [Bacillus cereus BGSC 6E1], gi\|22859... gi\|229189643, gi... - gi\|229189643\|ref\|ZP_04316658.1\| Purine nucleoside phosphorylase [Bacillus cereus ATCC 10876], gi\|228... gi\|228587660, gi... - gi\|229195763\|ref\|ZP_04322523.1\| Purine nucleoside phosphorylase [Bacillus cereus m1293], gi\|22858766... DEOD_BACAA - Purine nucleoside phosphorylase DeoD-type OS=Bacillus anthracis (strain A0248) GN=deoD PE=3 SV=1 gi\|254682374 - gi\|254682374\|ref\|ZP_05146235.1\| purine nucleoside phosphorylase [Bacillus anthracis str. CNEVA-9066] gi\|254721242 - gi\|254721242\|ref\|ZP_05183032.1\| purine nucleoside phosphorylase [Bacillus anthracis str. A1055] DEOD_BACC1 - Purine nucleoside phosphorylase DeoD-type OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=deoD P... gi\|254733789 - gi\|254733789\|ref\|ZP_05191503.1\| purine nucleoside phosphorylase [Bacillus anthracis str. Western Nor... gi\|30261559, gi\|... - gi\|30261559\|ref\|NP_843936.1\| purine nucleoside phosphorylase [Bacillus anthracis str. Ames], gi\|3025... gi\|254740520 - gi\|254740520\|ref\|ZP_05198211.1\| purine nucleoside phosphorylase [Bacillus anthracis str. Kruger B] gi\|65318829, gi\|... - gi\|65318829\|ref\|ZP_00391788.1\| COG0813: Purine-nucleoside phosphorylase [Bacillus anthracis str. A20... gi\|254753909 - gi\|254753909\|ref\|ZP_05205944.1\| purine nucleoside phosphorylase [Bacillus anthracis str. Vollum] gi\|47569132, gi\|... - gi\|47569132\|ref\|ZP_00239820.1\| purine nucleoside phosphorylase [Bacillus cereus G9241], gi\|47554203\|... gi\|254759005 - gi\|254759005\|ref\|ZP_05211032.1\| purine nucleoside phosphorylase [Bacillus anthracis str. Australia 9...	177.0	[0..1]	[258..1]
DEOD_XENNA - Purine nucleoside phosphorylase DeoD-type OS=Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 /... DEOD_XENNE - Purine nucleoside phosphorylase deoD-type OS=Xenorhabdus nematophilus GN=deoD PE=3 SV=1	176.0	[0..2]	[256..3]
gi\|228900142, gi... - gi\|228900142\|ref\|ZP_04064375.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis IBL 4222], g... gi\|75761466, gi\|... - gi\|75761466\|ref\|ZP_00741432.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis serovar israe...	176.0	[0..1]	[258..1]
gi\|228775036, gi... - gi\|228984642\|ref\|ZP_04144815.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis serovar toch... DEOD_BACCR - Purine nucleoside phosphorylase DeoD-type OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 ... gi\|229043304, gi... - gi\|229043304\|ref\|ZP_04191024.1\| Purine nucleoside phosphorylase [Bacillus cereus AH676], gi\|22872601... gi\|228801754, gi... - gi\|228957838\|ref\|ZP_04119578.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis serovar paki... gi\|228639170, gi... - gi\|229144162\|ref\|ZP_04272576.1\| Purine nucleoside phosphorylase [Bacillus cereus BDRD-ST24], gi\|2286... gi\|228628257, gi... - gi\|229155130\|ref\|ZP_04283242.1\| Purine nucleoside phosphorylase [Bacillus cereus ATCC 4342], gi\|2286... gi\|228674487, gi... - gi\|229109018\|ref\|ZP_04238619.1\| Purine nucleoside phosphorylase [Bacillus cereus Rock1-15], gi\|22867... gi\|228656817, gi... - gi\|229126877\|ref\|ZP_04255889.1\| Purine nucleoside phosphorylase [Bacillus cereus BDRD-Cer4], gi\|2286...	176.0	[0..1]	[258..1]
DEOD_BACCN - Purine nucleoside phosphorylase DeoD-type OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 3...	176.0	[0..1]	[258..1]
DEOD_MANSM - Purine nucleoside phosphorylase DeoD-type OS=Mannheimia succiniciproducens (strain MBEL55E) GN=deoD ...	176.0	[0..1]	[254..1]
DEOD_THETN - Purine nucleoside phosphorylase deoD-type OS=Thermoanaerobacter tengcongensis GN=deoD PE=3 SV=1 DEOD_CALS4 - Purine nucleoside phosphorylase DeoD-type OS=Caldanaerobacter subterraneus subsp. tengcongensis (str...	174.0	[0..1]	[256..1]

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Predicted Domain #1

Region A:
Residues: [1-261]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNPQQVSAS KTLSPILVQG AMDIEVETLI AALGKVTVNT FGSWTFWEGE LSGHPVVVSR  60
   61 TEIGLANAAA ATTLAIAHYR PKLIINQGTA GGHDPKLYRG DIVIGETSFN MGSYLTKLTP 120
  121 KGQGIHPTQW QNFDMTMYLR ENGEVVKHNH FKADPALVEV ALSQAHHYTK GNVVKGIIGT 180
  181 GDEWNRELDR INWLHHTFGT AVEEMETSAA ALVAEAYKLP FVSIRILSNT DQHDQDCDPQ 240
  241 TAVDCQQFVL NIIQQLINTT K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	44.39794
Match:	2ac7A
Description:	No description for 2ac7A was found.

Predicted functions:

Term	Confidence	Notes
S-methyl-5-thioadenosine phosphorylase activity	3.89303327575747	bayes_pls_golite062009
transferase activity, transferring glycosyl groups	3.66765825367784	bayes_pls_golite062009
transferase activity, transferring pentosyl groups	3.65908655017573	bayes_pls_golite062009
catalytic activity	2.18268586151113	bayes_pls_golite062009
purine-nucleoside phosphorylase activity	1.46980781918487	bayes_pls_golite062009
binding	0.716947367672324	bayes_pls_golite062009
transferase activity	0.716715652241981	bayes_pls_golite062009
protein binding	0.294648445670962	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: