YRC Public Data Repository - Protein Structure Prediction

Protein:	GLSA_SHEON
Organism:	Shewanella oneidensis MR-1
Length:	304 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLSA_SHEON.

Description	E-value	Query Range	Subject Range
GLSA_YERPN - Glutaminase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=glsA PE=3 SV=1 gi\|149290657, gi... - gi\|149367043\|ref\|ZP_01889076.1\| putative glutaminase [Yersinia pestis CA88-4125], gi\|149290657\|gb\|ED... gi\|145597872, gi... - gi\|145597872\|ref\|YP_001161948.1\| glutaminase [Yersinia pestis Pestoides F], gi\|145209568\|gb\|ABP38975... gi\|89102074, gi\|... - gi\|89102074\|ref\|ZP_01174739.1\| COG2066: Glutaminase [Yersinia pestis biovar Orientalis str. IP275], ... gi\|108806312, gi... - gi\|108806312\|ref\|YP_650228.1\| glutaminase [Yersinia pestis Antiqua], gi\|108778225\|gb\|ABG12283.1\| L-g... gi\|165923158, gi... - gi\|165924958\|ref\|ZP_02220790.1\| glutaminase [Yersinia pestis biovar Orientalis str. F1991016], gi\|16... gi\|162353396, gi... - gi\|77633210\|ref\|ZP_00795354.1\| COG2066: Glutaminase [Yersinia pestis Angola], gi\|162420581\|ref\|YP_00... gi\|45438099, gi\|... - gi\|45443231\|ref\|NP_994770.1\| glutaminase [Yersinia pestis biovar Microtus str. 91001], gi\|45438099\|g... gi\|22127212, gi\|... - gi\|22127212\|ref\|NP_670635.1\| glutaminase [Yersinia pestis KIM], gi\|21960280\|gb\|AAM86886.1\|AE013935_3... gi\|229837645, gi... - gi\|229837645\|ref\|ZP_04457807.1\| putative glutaminase [Yersinia pestis Pestoides A], gi\|229704333\|gb\|... gi\|218928120, gi... - gi\|218928120\|ref\|YP_002345995.1\| glutaminase [Yersinia pestis CO92], gi\|16121252\|ref\|NP_404565.1\| gl... gi\|229697235, gi... - gi\|229840869\|ref\|ZP_04461028.1\| putative glutaminase [Yersinia pestis biovar Orientalis str. PEXU2],... gi\|229690880, gi... - gi\|229842570\|ref\|ZP_04462725.1\| putative glutaminase [Yersinia pestis biovar Orientalis str. India 1... gi\|165990877, gi... - gi\|166010391\|ref\|ZP_02231289.1\| glutaminase [Yersinia pestis biovar Antiqua str. E1979001], gi\|16599... gi\|166212862, gi... - gi\|166212862\|ref\|ZP_02238897.1\| glutaminase [Yersinia pestis biovar Antiqua str. B42003004], gi\|1662... gi\|167399886, gi... - gi\|167399886\|ref\|ZP_02305404.1\| glutaminase [Yersinia pestis biovar Antiqua str. UG05-0454], gi\|1670... gi\|167422002, gi... - gi\|167422002\|ref\|ZP_02313755.1\| glutaminase [Yersinia pestis biovar Orientalis str. MG05-1020], gi\|1... gi\|167426699, gi... - gi\|167426699\|ref\|ZP_02318452.1\| glutaminase [Yersinia pestis biovar Mediaevalis str. K1973002], gi\|1... GLSA1_YERPE - Glutaminase 1 OS=Yersinia pestis GN=glsA1 PE=3 SV=1	478.0	[0..3]	[304..6]
gi\|186699681, gi... - gi\|186896655\|ref\|YP_001873767.1\| glutaminase [Yersinia pseudotuberculosis PB1/+], gi\|186699681\|gb\|AC... gi\|170023072, gi... - gi\|170023072\|ref\|YP_001719577.1\| glutaminase [Yersinia pseudotuberculosis YPIII], gi\|169749606\|gb\|AC... Q666M7\|Q666M7_YERPS - Putative glutaminase - Yersinia pseudotuberculosis gi\|51597531, gi\|... - gi\|51597531\|ref\|YP_071722.1\| glutaminase [Yersinia pseudotuberculosis IP 32953], gi\|51590813\|emb\|CAH...	477.0	[0..3]	[304..6]
gi\|117672578, gi... - gi\|77630197\|ref\|ZP_00792783.1\| COG2066: Glutaminase [Yersinia pseudotuberculosis IP 31758], gi\|15395...	477.0	[0..3]	[304..6]
gi\|91228694, gi\|... - gi\|91228694\|ref\|ZP_01262608.1\| glutaminase [Vibrio alginolyticus 12G01], gi\|91187765\|gb\|EAS74083.1\| ...	476.0	[0..2]	[304..3]
gi\|254230232, gi... - gi\|254230232\|ref\|ZP_04923624.1\| glutaminase superfamily [Vibrio sp. Ex25], gi\|194538709\|ref\|YP_00207...	476.0	[0..2]	[304..3]
GLSA_VIBVU - Glutaminase OS=Vibrio vulnificus (strain CMCP6) GN=glsA PE=3 SV=1 GLSA_VIBVU - Glutaminase OS=Vibrio vulnificus GN=glsA PE=3 SV=1 GLSA_VIBVY - Glutaminase OS=Vibrio vulnificus (strain YJ016) GN=glsA PE=3 SV=2	475.0	[0..2]	[304..3]
gi\|37681066, gi\|... - gi\|37681066\|ref\|NP_935675.1\| glutaminase [Vibrio vulnificus YJ016], gi\|37199816\|dbj\|BAC95646.1\| glut...	475.0	[0..2]	[304..8]
GLSA_VIBF1 - Glutaminase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=glsA PE=3 SV=1	474.0	[0..2]	[304..3]
gi\|238798796, gi... - gi\|77961507\|ref\|ZP_00825343.1\| COG2066: Glutaminase [Yersinia mollaretii ATCC 43969], gi\|238798796\|r...	473.0	[0..3]	[304..13]
GLSA_VIBPA - Glutaminase OS=Vibrio parahaemolyticus GN=glsA PE=3 SV=1 GLSA_VIBPA - Glutaminase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=glsA PE=3 SV=1	473.0	[0..2]	[304..3]

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Predicted Domain #1

Region A:
Residues: [1-304]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPETALLEEV VDRVRPLLGQ GKVANYIPAL ANIDPGKLGI AVTTIDGETI GAGDYLEPFS  60
   61 IQSISKVFSL TLALTLYEET EIWSRVGKEP SGHSFNSLVQ VELERGKPRN PFINAGALVI 120
  121 ADLLQSRLGA PKHRMLELVR ALSQNDKVCF DKQVADSEYQ HSARNAAIAY LMKSFGNFQG 180
  181 DVDTVLRTYF HYCALKMNCA DLSKAMLYLA NRGKTLDGTE LISQVQTRQL NALLATSGLY 240
  241 DGAGEFAYRV GMPGKSGVGG GIIAVIPGEL SVCVWSPELD TQGNSLAGTA MLEQLSQRLG 300
  301 RSIF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	115.0
Match:	2pbyA
Description:	No description for 2pbyA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits