YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24349274, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	167 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24349274, gi|....

Description	E-value	Query Range	Subject Range
OGT_METAC - Methylated-DNA--protein-cysteine methyltransferase OS=Methanosarcina acetivorans GN=ogt PE=3 SV=1 OGT_METAC - Methylated-DNA--protein-cysteine methyltransferase OS=Methanosarcina acetivorans (strain ATCC 35395 ...	213.0	[0..1]	[157..3]
gi\|2935421 - gi\|2935421\|gb\|AAC25987.1\| adaptive response regulatory protein [Pseudoalteromonas sp. S9]	210.0	[0..6]	[162..192]
gi\|186467753, gi... - gi\|23130248\|ref\|ZP_00112065.1\| COG2169: Adenosine deaminase [Nostoc punctiforme PCC 73102], gi\|18668...	207.0	[0..1]	[163..194]
gi\|215410956, gi... - gi\|215410957\|ref\|ZP_03419765.1\| methylated-DNA--protein-cysteine methyltransferase [Mycobacterium tu... gi\|215403161, gi... - gi\|215403161\|ref\|ZP_03415342.1\| methylated-DNA--protein-cysteine methyltransferase [Mycobacterium tu... OGT_MYCTU - Methylated-DNA--protein-cysteine methyltransferase OS=Mycobacterium tuberculosis GN=ogt PE=1 SV=1 gi\|215430201 - gi\|215430201\|ref\|ZP_03428120.1\| methylated-DNA--protein-cysteine methyltransferase [Mycobacterium tu... gi\|215426644 - gi\|215426644\|ref\|ZP_03424563.1\| methylated-DNA--protein-cysteine methyltransferase [Mycobacterium tu... gi\|218753025 - gi\|218753025\|ref\|ZP_03531821.1\| methylated-DNA--protein-cysteine methyltransferase [Mycobacterium tu... gi\|121637246, gi... - gi\|121637246\|ref\|YP_977469.1\| putative methylated-DNA--protein-cysteine methyltransferase ogt [Mycob... gi\|215445494 - gi\|215445494\|ref\|ZP_03432246.1\| methylated-DNA--protein-cysteine methyltransferase [Mycobacterium tu... gi\|224989720, gi... - gi\|224989720\|ref\|YP_002644407.1\| putative methylated-DNA--protein-cysteine methyltransferase [Mycoba... OGT_MYCTO - Methylated-DNA--protein-cysteine methyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / ... gi\|253321141, gi... - gi\|253799638\|ref\|YP_003032639.1\| methylated-DNA-protein-cysteine methyltransferase ogt [Mycobacteriu... gi\|254550324 - gi\|254550324\|ref\|ZP_05140771.1\| methylated-DNA--protein-cysteine methyltransferase [Mycobacterium tu... gi\|254815123 - gi\|254815123\|ref\|ZP_05220124.1\| methylated-DNA--protein-cysteine methyltransferase [Mycobacterium tu... gi\|255096099 - gi\|255096099\|ref\|ZP_05325577.1\| methylated-DNA--protein-cysteine methyltransferase [Mycobacterium tu... gi\|119701175, gi... - gi\|76784875\|ref\|ZP_00772055.1\| COG0350: Methylated DNA-protein cysteine methyltransferase [Mycobacte... gi\|81254727 - gi\|81254727\|ref\|ZP_00879236.1\| COG0350: Methylated DNA-protein cysteine methyltransferase [Mycobacte... gi\|167967588, gi... - gi\|167967588\|ref\|ZP_02549865.1\| methylated-DNA-protein-cysteine methyltransferase ogt [Mycobacterium... OGT_MYCTU - Methylated-DNA--protein-cysteine methyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 ... OGT_MYCBO - Methylated-DNA--protein-cysteine methyltransferase OS=Mycobacterium bovis GN=ogt PE=3 SV=1 OGT_MYCBO - Methylated-DNA--protein-cysteine methyltransferase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2...	206.0	[0..1]	[166..4]
gi\|13880961, gi\|... - gi\|15840768\|ref\|NP_335805.1\| methylated-DNA--protein-cysteine methyltransferase [Mycobacterium tuber...	206.0	[0..1]	[166..12]
gi\|25286136 - pir\|\|E83777 O6-methylguanine DNA alkyltransferase dat [imported] - Bacillus halodurans (strain C-125... gi\|15613584, gi\|... - gi\|15613584\|ref\|NP_241887.1\| O6-methylguanine DNA alkyltransferase [Bacillus halodurans C-125], gi\|1...	206.0	[0..4]	[158..11]
gi\|67908812, gi\|... - gi\|91787519\|ref\|YP_548471.1\| methylated-DNA--protein-cysteine methyltransferase [Polaromonas sp. JS6...	205.0	[0..2]	[165..10]
gi\|88780111, gi\|... - gi\|88797242\|ref\|ZP_01112832.1\| methylated-DNA-protein-cysteine S-methyltransferase [Reinekea sp. MED...	205.0	[0..1]	[157..4]
OGT_METBF - Methylated-DNA--protein-cysteine methyltransferase OS=Methanosarcina barkeri (strain Fusaro / DSM 80...	204.0	[0..1]	[156..3]
gi\|72160770, gi\|... - gi\|72160770\|ref\|YP_288427.1\| methylated-DNA (protein)-cysteine S-methyltransferase [Thermobifida fus...	204.0	[0..2]	[167..48]

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Predicted Domain #1

Region A:
Residues: [1-167]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLVTPVGE LQLNANAYGL SHLTVMGSSR TEILLRHASE AEYALASEHI EQAKAQLARY  60
   61 FNGDLTQFNL SLAPKGTEFQ RQVWQALIAV DYGQCCSYAD IAERIARPKA VRAVGAANGA 120
  121 NPIAIIVPCH RIIGKNGQLT GYAYGLGMKQ QLLMLESTSK GAHFTLE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	49.0
Match:	1sfeA
Description:	ADA O6-METHYLGUANINE-DNA METHYLTRANSFERASE FROM ESCHERICHIA COLI
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
methylated-DNA-[protein]-cysteine S-methyltransferase activity	3.9938943760254	bayes_pls_golite062009
S-methyltransferase activity	2.96219931728042	bayes_pls_golite062009
catalytic activity	2.27882522649583	bayes_pls_golite062009
methyltransferase activity	1.63681159093596	bayes_pls_golite062009
transferase activity, transferring one-carbon groups	1.6341981985862	bayes_pls_golite062009
transferase activity	1.42883081715544	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: