| Protein: | gi|24349189, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 389 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24349189, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
225.0 | [0..2] | [389..42] |
|
|
219.0 | [0..1] | [389..1] |
|
|
218.0 | [0..1] | [389..32] |
|
|
214.0 | [0..1] | [389..1] |
|
Region A: Residues: [1-389] |
1 11 21 31 41 51
| | | | | |
1 MKKKLLAVMI PAVLLTGTTQ AVELYNDQTN SVNMMGWLGF AALNDGHETS VIDNFSRVGF 60
61 RFDRQEKNGW RSFAHTEWGI NMVTSDDGLI YTQGQGGGQL SASKTSDFLF NRLGYVGMAH 120
121 EKWGTLSFGK QWGAYYDVAY TTDVLNAFTG WSVGAYTFGD GGLTGAGRAD AALQYRNTFG 180
181 NLHIAVQYAS KQNSDVALYD NQGHALNDGS ELSFDPSYGA SATYYITDKF KVLAGFNRGD 240
241 FTGNLAGKDV DNTNQIMGIG AQYGSFYQYA PGRDADGLYV GFNAHKSEQN ELVGGELYDS 300
301 TGAEFIVAYQ YDNGFVPSVL LTYQDLDTDE NTAIQGKWTR QFAVLGLHYR YSRDTIMYAE 360
361 AKIDFSNMDD KAYEDLQDNN YAVGIRYFF
|
| Detection Method: |  |
| Confidence: | 47.0 |
| Match: | 1osmA |
| Description: | Porin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 2.60507547654721 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.86109425700917 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.424956094980482 | bayes_pls_golite062009 |
