YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24349152, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	206 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24349152, gi|....

Description	E-value	Query Range	Subject Range
gi\|77460163, gi\|... - gi\|77460163\|ref\|YP_349670.1\| hypothetical protein Pfl01_3942 [Pseudomonas fluorescens Pf0-1], gi\|773...	158.0	[0..21]	[189..163]
gi\|38372162 - gi\|38372162\|gb\|AAR18814.1\| aminoglycoside 6-N-acetyltransferase [Klebsiella pneumoniae]	153.0	[0..20]	[192..97]
gi\|95109949 - gi\|95109949\|emb\|CAK14654.1\| siderophore biosynthesis protein [Pseudomonas entomophila L48] gi\|104780962, gi... - gi\|95109949\|emb\|CAK14654.1\| siderophore biosynthesis protein [Pseudomonas entomophila L48], gi\|10478...	151.0	[0..22]	[191..166]
tr\|E5D591\|E5D591... - Aac(6')-Ib-cr OS=Serratia rubidaea GN=aac(6')-Ib-cr PE=4 SV=1 gi\|187373303 - gi\|187373303\|gb\|ACD03322.1\| acetyltransferase [Kluyvera ascorbata] gi\|121072977, gi... - gi\|215528096\|ref\|YP_002332851.1\| aminoglycoside acetyltransferase [Klebsiella pneumoniae], gi\|187373... gi\|221665316, gi... - gi\|83367092\|gb\|ABC17627.1\| fluroquinolone acetylating aminoglycoside acetyltransferase [Escherichia ...	151.0	[0..20]	[192..21]
gi\|116695620, gi... - gi\|116695620\|ref\|YP_841196.1\| siderophore biosynthesis related protein/acetyltransferase or N-acetyl...	151.0	[0..22]	[193..174]
gi\|52858433 - gi\|52858433\|gb\|AAU89126.1\| fused aminoglycoside (3') adenylyltransferase-aminoside (6')acetyltransfe...	150.0	[0..19]	[192..284]
gi\|49084854, gi\|... - gi\|67516347\|ref\|XP_658059.1\| hypothetical protein AN0455.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	150.0	[0..8]	[196..318]
gi\|82411012, gi\|... - gi\|82702947\|ref\|YP_412513.1\| hypothetical protein Nmul_A1824 [Nitrosospira multiformis ATCC 25196], ...	150.0	[0..21]	[194..175]
gi\|67157319, gi\|... - gi\|67157319\|ref\|ZP_00418621.1\| hypothetical protein AvinDRAFT_2791 [Azotobacter vinelandii AvOP], gi...	150.0	[0..4]	[193..159]

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Predicted Domain #1

Region A:
Residues: [1-206]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQWSRRCA DSLSKHIVIN EFVFKPLNLE QDIPMLQSWL NQNYAKFWGM QGMTQATITA  60
   61 AMAPSEHKLA LIGEWQAKPL FMVELYDPAH DEIGQHYQVK PLDCGMHLIL APIEGKPVHG 120
  121 LSRKVMAAIA QLILETLAFT RLVVEPDQQN HKIHRLNCQI GIRYQKAIQL STKAAFLGFC 180
  181 SAQNRQTATQ AAPNCRVKIA LLPSHF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.0
Match:	2qmlA
Description:	No description for 2qmlA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits