YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24348966, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	122 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24348966, gi|....

Description	E-value	Query Range	Subject Range
gi\|47572214 - gi\|47572214\|ref\|ZP_00242259.1\| COG1393: Arsenate reductase and related proteins, glutaredoxin family... gi\|124260305, gi... - gi\|124267530\|ref\|YP_001021534.1\| arsenate reductase [Methylibium petroleiphilum PM1], gi\|124260305\|g...	140.0	[0..7]	[122..1]
gi\|23015073 - gi\|23015073\|ref\|ZP_00054861.1\| COG1393: Arsenate reductase and related proteins, glutaredoxin family...	138.0	[0..3]	[122..2]
gi\|45914285, gi\|... - gi\|69279982\|ref\|ZP_00614697.1\| Arsenate reductase [Mesorhizobium sp. BNC1], gi\|68189637\|gb\|EAN04301....	138.0	[0..8]	[122..1]
gi\|69933848, gi\|... - gi\|69933848\|ref\|ZP_00628984.1\| Arsenate reductase [Paracoccus denitrificans PD1222], gi\|69154195\|gb\|...	137.0	[0..5]	[122..174]
gi\|78387353, gi\|... - gi\|90422139\|ref\|YP_530509.1\| arsenate reductase [Rhodopseudomonas palustris BisB18], gi\|90104153\|gb\|...	137.0	[0..8]	[122..1]
gi\|88062841 - gi\|88062841\|gb\|ABD39042.1\| arsenate reductase [Mesorhizobium loti]	137.0	[0..8]	[122..1]
gi\|52002858, gi\|... - gi\|52785010\|ref\|YP_090839.1\| transcriptional regulator Spx [Bacillus licheniformis ATCC 14580], gi\|5...	136.0	[0..9]	[122..1]
gi\|114538726, gi... - gi\|114705880\|ref\|ZP_01438783.1\| arsenate reductase [Fulvimarina pelagi HTCC2506], gi\|114538726\|gb\|EA...	136.0	[0..8]	[122..1]
gi\|15074007 - gi\|15074007\|emb\|CAC45654.1\| Arsenate reductase [Sinorhizobium meliloti 1021] gi\|15964828 - gi\|15964828\|ref\|NP_385181.1\| arsenate reductase protein [Sinorhizobium meliloti 1021]	136.0	[0..8]	[122..1]

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Predicted Domain #1

Region A:
Residues: [1-122]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHTSTMTKV TIYHNPRCSK SRETLALLEQ QGCDITVVEY LENPPSAAEI HEILAKLQLS  60
   61 ARELIRTKED EYQALGLSDP TLSEETLIKA MVNTPKLIER PIVLANQQAA IGRPLENVLN 120
  121 IL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.30103
Match:	1jzwA
Description:	Arsenate reductase ArsC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
antioxidant activity	0.92550006805966	bayes_pls_golite062009
peroxidase activity	0.62384958394125	bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor	0.62384958394125	bayes_pls_golite062009
catalytic activity	0.276204095462236	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: