YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24348695, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	789 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24348695, gi|....

Description	E-value	Query Range	Subject Range
gi\|84393858, gi\|... - gi\|84393858\|ref\|ZP_00992602.1\| phosphoenolpyruvate synthase [Vibrio splendidus 12B01], gi\|84375505\|g...	828.0	[0..1]	[787..1]
gi\|86145070, gi\|... - gi\|86145070\|ref\|ZP_01063402.1\| phosphoenolpyruvate synthase [Vibrio sp. MED222], gi\|85837969\|gb\|EAQ5...	826.0	[0..1]	[787..1]
gi\|91224111, gi\|... - gi\|91224111\|ref\|ZP_01259374.1\| phosphoenolpyruvate synthase [Vibrio alginolyticus 12G01], gi\|9119102...	824.0	[0..1]	[789..1]
gi\|68542136, gi\|... - gi\|68542136\|ref\|ZP_00581872.1\| Phosphoenolpyruvate synthase [Shewanella baltica OS155], gi\|68520208\|... gi\|160875713, gi... - gi\|160875713\|ref\|YP_001555029.1\| phosphoenolpyruvate synthase [Shewanella baltica OS195], gi\|1608612...	823.0	[0..1]	[788..1]
gi\|116187231, gi... - gi\|75857809\|ref\|ZP_00765421.1\| COG0574: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase [Vi...	823.0	[0..1]	[789..7]
gi\|77866250, gi\|... - gi\|77954840\|ref\|ZP_00819225.1\| Phosphoenolpyruvate synthase [Marinobacter aquaeolei VT8], gi\|7786625...	822.0	[0..1]	[785..1]
gi\|28808538, gi\|... - gi\|28900227\|ref\|NP_799882.1\| phosphoenolpyruvate synthase [Vibrio parahaemolyticus RIMD 2210633], gi... gi\|28808538 - gi\|28808538\|dbj\|BAC61715.1\| phosphoenolpyruvate synthase [Vibrio parahaemolyticus RIMD 2210633] gi\|149749264, gi... - gi\|153837464\|ref\|ZP_01990131.1\| phosphoenolpyruvate synthase [Vibrio parahaemolyticus AQ3810], gi\|14...	821.0	[0..1]	[787..7]
gi\|90440499, gi\|... - gi\|90577413\|ref\|ZP_01233224.1\| phosphoenolpyruvate synthase [Vibrio angustum S14], gi\|90440499\|gb\|EA...	821.0	[0..1]	[782..1]
gi\|89072223, gi\|... - gi\|89072223\|ref\|ZP_01158802.1\| phosphoenolpyruvate synthase [Photobacterium sp. SKA34], gi\|89051755\|...	816.0	[0..1]	[782..1]
gi\|77382000, gi\|... - gi\|77457997\|ref\|YP_347502.1\| phosphoenolpyruvate synthase [Pseudomonas fluorescens Pf0-1], gi\|773820...	814.0	[0..1]	[789..1]

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Predicted Domain #1

Region A:
Residues: [1-789]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQYVLWYQE LGMGDVNLVG GKNASLGEMI SNLANAGVQV PGGFATTSYA FNEFLEQSGV  60
   61 NQKIYDILAT LDVDDVNALA KVGAQIRQWV IDTPFQPALE QAIREAYEKL AAETSDASFA 120
  121 VRSSATAEDM PDASFAGQQE TFLNVKGFDS VLVAIKHVFA SLFNDRAISY RVHQGYEHHG 180
  181 VALSAGVQRM VRSDKAASGV MFTMDTESGN NDVVFITSSF GLGEMVVQGA VNPDEFYVHK 240
  241 PILSQGHKAV VRRNIGSKLI QMVYSDDAAH GKQVKIEDVA ADKRRQFSIN DAEVMELAKQ 300
  301 AMVIEKHYGR PMDIEWAKDG NDGKLYIVQA RPETVRSRED VQLIERYHLK SRGAVISEGR 360
  361 AIGHKVGSGV AKVLTSIADM DQIQPGDVLV TDMTDPDWEP IMKRASAIVT NRGGRTCHAA 420
  421 IIARELGVPA VVGCGDVTDR IKNGQWVTVS CAEGDTGFIY EGKQEFEVVS NRVDALPALP 480
  481 MKIMMNVGNP DRAFDFARLP NEGVGLARLE FIINRMIGIH PKALLEFNQQ DAALQEEINE 540
  541 MIAGYDSPVE FYIARLVEGI ASIGSAFYPK KVIVRMSDFK SNEYANLVGG DRYEPEEENP 600
  601 MLGFRGASRY ISESFRDCFA LECEAIKRVR NEMGLKNVEV MIPFVRTVKE AEQVIELLKE 660
  661 QGLERGKDGL RVIMMCEVPS NALLADQFLE HFDGFSIGSN DLTQLTLGLD RDSGIISHLF 720
  721 DERNEAVKIL LSMAIKAAKA KGAYIGICGQ GPSDHADFAA WLVEQGIDTV SLNPDTVIDT 780
  781 WLYLAEAHA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	1000.0
Match:	2olsA
Description:	No description for 2olsA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits